Dyella jejuensis sp nov., Isolated from Soil of Hallasan Mountain in Jeju Islands

被引:14
作者
Kim, Min-Soo [1 ,2 ]
Hyun, Dong-Wook [1 ,2 ]
Kim, Joon Yong [1 ,2 ]
Kim, Soyeon [3 ]
Bae, Jin-Woo [1 ,2 ]
Park, Eun-Jin [3 ]
机构
[1] Kyung Hee Univ, Dept Life & Nanopharmaceut Sci, Seoul 130701, South Korea
[2] Kyung Hee Univ, Dept Biol, Seoul 130701, South Korea
[3] Jeju Natl Univ, Dept Food Bioengn, Cheju 690756, South Korea
关键词
Dyella; Dyella jejuensis sp nov; taxonomy;
D O I
10.1007/s12275-014-3670-7
中图分类号
Q93 [微生物学];
学科分类号
071005 ; 100705 ;
摘要
A novel bacterium, designated JP1(T), was isolated from soil of Hallasan Mountain in Jeju Island. The isolate was a Gram-negative, aerobic, motile and rod-shaped (0.2-0.4 x 1.2-2.0 run) bacterium. Phylogenetic analysis based on the 16S rRNA gene sequence showed that strain JP1T was closely related to Dyella koreensis with 97.6% similarity. Growth of strain JP1T occurred at 10-37 degrees C, pH 5-7 and 0-1% (w/v) NaCl. The genomic DNA G+C content of strain JP1(T) was 62.1 mol%. The major fatty acids were iso-C-16:0, iso-C-17:1 omega 9c, and iso-C-15:0. The predominant quinone was ubiquinone-8. The major polar lipids of strain JP1(T) were phosphatidylglycerol, phosphatidylethanolamine, diphosphatidylglycerol, unidentified aminolipids and unidentified aminophospholipids. The DNA-DNA relatedness values between strain JP1(T) and previously reported Dyella species were <10%. Based on phenotypic, genotypic, and phylogenetic distinctness, strain JP1(T) represents a novel species in the genus Dyella, for which the name Dyella jejuensis sp. nov. is proposed. The type strain is JP1(T) (=KACC 17701(T) = JCM 19615(T)).
引用
收藏
页码:373 / 377
页数:5
相关论文
共 24 条
[1]   Dyella thiooxydans sp. nov., a facultatively chemolithotrophic, thiosulfate-oxidizing bacterium isolated from rhizosphere soil of sunflower (Helianthus annuus L.) [J].
Anandham, Rangasamy ;
Kwon, Soon-Wo ;
Gandhi, Pandiyan Indira ;
Kim, Soo-Jin ;
Weon, Hang-Yeon ;
Kim, Yi-Seul ;
Sa, Tong-Min ;
Kim, Yong-Ki ;
Jee, Hyeong-Jin .
INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY, 2011, 61 :392-398
[2]  
[Anonymous], 1989, Molecular Cloning: A Laboratory
[3]   Statistical superiority of genome-probing microarrays as genomic DNA-DNA hybridization in revealing the bacterial phylogenetic relationship compared to conventional methods [J].
Chang, Ho-Won ;
Nam, Young-Do ;
Jung, Min Young ;
Kim, Kyoung-Ho ;
Roh, Seong Woon ;
Kim, Min-Soo ;
Jeon, Che Ok ;
Yoon, Jung-Hoon ;
Bae, Jin-Woo .
JOURNAL OF MICROBIOLOGICAL METHODS, 2008, 75 (03) :523-530
[4]   A NOTE ON THE SEPARATION OF NATURAL MIXTURES OF BACTERIAL UBIQUINONES USING REVERSE-PHASE PARTITION THIN-LAYER CHROMATOGRAPHY AND HIGH-PERFORMANCE LIQUID-CHROMATOGRAPHY [J].
COLLINS, MD ;
JONES, D .
JOURNAL OF APPLIED BACTERIOLOGY, 1981, 51 (01) :129-134
[5]   A fluorimetric method for the estimation of G+C mol% content in microorganisms by thermal denaturation temperature [J].
Gonzalez, JM ;
Saiz-Jimenez, C .
ENVIRONMENTAL MICROBIOLOGY, 2002, 4 (11) :770-773
[6]   Shimia haliotis sp nov., a bacterium isolated from the gut of an abalone, Haliotis discus hannai [J].
Hyun, Dong-Wook ;
Kim, Min-Soo ;
Shin, Na-Ri ;
Kim, Joon Yong ;
Kim, Pil Soo ;
Whon, Tae Woong ;
Yun, Ji-Hyun ;
Bae, Jin-Woo .
INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY, 2013, 63 :4248-4253
[7]  
JUKES T H, 1969, P21
[8]   Dyella ginsengisoli sp nov., isolated from soil of a ginseng field in South Korea [J].
Jung, Hae-Min ;
Ten, Leonid N. ;
Kim, Kyoung-Ho ;
An, Dong Shan ;
Im, Wan-Taek ;
Lee, Sung-Taik .
INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY, 2009, 59 :460-465
[9]   Dyella yeojuensis sp nov., isolated from greenhouse soil in Korea [J].
Kim, Byung-Yong ;
Weon, Hang-Yeon ;
Lee, Kang-Hyo ;
Seok, Soon-Ja ;
Kwon, Soon-Wo ;
Go, Seung-Joo ;
Stackebrandt, Erko .
INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY, 2006, 56 :2079-2082
[10]   Introducing EzTaxon-e: a prokaryotic 16S rRNA gene sequence database with phylotypes that represent uncultured species [J].
Kim, Ok-Sun ;
Cho, Yong-Joon ;
Lee, Kihyun ;
Yoon, Seok-Hwan ;
Kim, Mincheol ;
Na, Hyunsoo ;
Park, Sang-Cheol ;
Jeon, Yoon Seong ;
Lee, Jae-Hak ;
Yi, Hana ;
Won, Sungho ;
Chun, Jongsik .
INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY, 2012, 62 :716-721