Brain tumor segmentation using K-means clustering and deep learning with synthetic data augmentation for classification

被引:120
作者
Khan, Amjad Rehman [1 ]
Khan, Siraj [2 ]
Harouni, Majid [3 ]
Abbasi, Rashid [4 ]
Iqbal, Sajid [5 ]
Mehmood, Zahid [6 ]
机构
[1] CCIS Prince Sultan Univ, Artificial Intelligence & Data Analyt Lab, Riyadh, Saudi Arabia
[2] Islamia Coll Univ, Dept Comp Sci, Peshawar, Pakistan
[3] Islamic Coll Univ, Dolatabad Branch, Dept Comp Engn, Esfahan, Iran
[4] Univ Elect Sci & Technol China, Sch Informat & Commun Engn, Chengdu, Sichuan, Peoples R China
[5] Bahauddin Zakariya Univ, Dept Comp Sci, Multan, Pakistan
[6] Univ Engn & Technol, Dept Comp Engn, Taxila, Pakistan
关键词
cancer; health systems; healthcare; synthetic data augmentation; VGG19; WHO; AUTOMATED NUCLEI SEGMENTATION; FEATURES; DISEASES; FUSION; SYSTEM; IMAGES; CNN; EXTRACTION; ALGORITHM; FRAMEWORK;
D O I
10.1002/jemt.23694
中图分类号
R602 [外科病理学、解剖学]; R32 [人体形态学];
学科分类号
100101 ;
摘要
Image processing plays a major role in neurologists' clinical diagnosis in the medical field. Several types of imagery are used for diagnostics, tumor segmentation, and classification. Magnetic resonance imaging (MRI) is favored among all modalities due to its noninvasive nature and better representation of internal tumor information. Indeed, early diagnosis may increase the chances of being lifesaving. However, the manual dissection and classification of brain tumors based on MRI is vulnerable to error, time-consuming, and formidable task. Consequently, this article presents a deep learning approach to classify brain tumors using an MRI data analysis to assist practitioners. The recommended method comprises three main phases: preprocessing, brain tumor segmentation using k-means clustering, and finally, classify tumors into their respective categories (benign/malignant) using MRI data through a finetuned VGG19 (i.e., 19 layered Visual Geometric Group) model. Moreover, for better classification accuracy, the synthetic data augmentation concept i s introduced to increase available data size for classifier training. The proposed approach was evaluated on BraTS 2015 benchmarks data sets through rigorous experiments. The results endorse the effectiveness of the proposed strategy and it achieved better accuracy compared to the previously reported state of the art techniques.
引用
收藏
页码:1389 / 1399
页数:11
相关论文
共 89 条
[61]  
Rehman A., 2020, P 2020 9 INT C SOFTW, P97, DOI DOI 10.1002/JEMT.23269
[62]   Microscopic brain tumor detection and classification using3D CNNand feature selection architecture [J].
Rehman, Amjad ;
Khan, Muhammad Attique ;
Saba, Tanzila ;
Mehmood, Zahid ;
Tariq, Usman ;
Ayesha, Noor .
MICROSCOPY RESEARCH AND TECHNIQUE, 2021, 84 (01) :133-149
[63]   Microscopic melanoma detection and classification: A framework of pixel-based fusion and multilevel features reduction [J].
Rehman, Amjad ;
Khan, Muhammad A. ;
Mehmood, Zahid ;
Saba, Tanzila ;
Sardaraz, Muhammad ;
Rashid, Muhammad .
MICROSCOPY RESEARCH AND TECHNIQUE, 2020, 83 (04) :410-423
[64]   Classification of acute lymphoblastic leukemia using deep learning [J].
Rehman, Amjad ;
Abbas, Naveed ;
Saba, Tanzila ;
Rahman, Syed Ijaz ur ;
Mehmood, Zahid ;
Kolivand, Hoshang .
MICROSCOPY RESEARCH AND TECHNIQUE, 2018, 81 (11) :1310-1317
[65]   Microscopic malaria parasitemia diagnosis and grading on benchmark datasets [J].
Rehman, Amjad ;
Abbas, Naveed ;
Saba, Tanzila ;
Mehmood, Zahid ;
Mahmood, Toqeer ;
Ahmed, Khawaja Tehseen .
MICROSCOPY RESEARCH AND TECHNIQUE, 2018, 81 (09) :1042-1058
[66]   Rouleaux red blood cells splitting in microscopic thin blood smear images via local maxima, circles drawing, and mapping with original RBCs [J].
Rehman, Amjad ;
Abbas, Naveed ;
Saba, Tanzila ;
Mahmood, Toqeer ;
Kolivand, Hoshang .
MICROSCOPY RESEARCH AND TECHNIQUE, 2018, 81 (07) :737-744
[67]   Computer vision for microscopic skin cancer diagnosis using handcrafted and non-handcrafted features [J].
Saba, Tanzila .
MICROSCOPY RESEARCH AND TECHNIQUE, 2021, 84 (06) :1272-1283
[68]   Recent advancement in cancer detection using machine learning: Systematic survey of decades, comparisons and challenges [J].
Saba, Tanzila .
JOURNAL OF INFECTION AND PUBLIC HEALTH, 2020, 13 (09) :1274-1289
[69]  
Saba T, 2020, J INFECT PUBLIC HEAL, V13, P1567, DOI [10.1016/j.jiph.2020.06.027, 10.1016/j.ijph.2020.06.027]
[70]   Brain tumor detection using fusion of hand crafted and deep learning features [J].
Saba, Tanzila ;
Mohamed, Ahmed Sameh ;
El-Affendi, Mohammad ;
Amin, Javeria ;
Sharif, Muhammad .
COGNITIVE SYSTEMS RESEARCH, 2020, 59 :221-230