Advances in viral disease diagnostic and molecular epidemiological technologies

被引:23
作者
Belak, Sandor [1 ,2 ]
Thoren, Peter [3 ]
LeBlanc, Neil [1 ,2 ,4 ]
Viljoen, Gerrit [5 ]
机构
[1] Swedish Univ Agr Sci, Joint Res & Dev Div, Dept Virol, SE-75689 Uppsala, Sweden
[2] World Org Anim Hlth, Natl Vet Inst, Collaborating Ctr Biotechnol Based Diag Infect Di, SE-75689 Uppsala, Sweden
[3] World Org Anim Hlth, Natl Vet Inst, Collaborating Ctr Biotechnol Based Diag Infect Di, Sect Mol Diagnost,Dept Virol Immunobiol & Parasit, SE-75689 Uppsala, Sweden
[4] Univ Uppsala Hosp, Virol Sect, Dept Med Sci, SE-75185 Uppsala, Sweden
[5] IAEA, Joint FAO IAEA Div Nucl Techn Food & Agr, Dept Nucl Sci & Applicat, Collaborating Ctr ELISA & Mol Tech Anim Dis Diag, A-1400 Vienna, Austria
关键词
amplification chemistry; detection chemistry; early and rapid diagnosis; label; microarray; molecular epidemiology; PCR; phylogeny; probe; transboundary animal disease; viral disease; viral metagenomic; OIE COLLABORATING CENTER; SWINE VESICULAR DISEASE; CHAIN-REACTION METHODS; RT-PCR ASSAY; AVIAN INFLUENZA; RAPID DETECTION; MOUTH-DISEASE; DIFFERENTIAL-DIAGNOSIS; HUMAN-METAPNEUMOVIRUS; RESPIRATORY VIRUSES;
D O I
10.1586/ERM.09.19
中图分类号
R36 [病理学];
学科分类号
100104 ;
摘要
The early and rapid detection and characterization of specific nucleic acids of medico-veterinary pathogens have proven invaluable for diagnostic purposes. The integration of amplification and signal detection systems, including online real-time devices, have increased speed and sensitivity and greatly facilitated the quantification of target nucleic acids. They have also allowed for sequence characterization using melting or hybridization curves. The newer-generation molecular diagnostic technologies offer, hitherto, unparalleled detection and discrimination methodologies, which are vital for the positive detection and identification of pathogenic agents, as well as the effects of the pathogens on the production of antibodies. The development phase of the novel technologies entails a thorough understanding of accurate diagnosis and discrimination of present and emerging diseases. The development of novel technologies can only be successful if they are transferred and used in the field with a sustainable quality-assured application to allow for the optimal detection and effective control of diseases. The aim of these new tools is to detect the presence of a pathogen agent before the onset of disease. This manuscript focuses mainly on the experiences of two World Organisation for Animal Health collaborating centers in context to molecular diagnosis and molecular epidemiology of transboundary and endemic animal diseases of viral origin, food safety and zoonoses.
引用
收藏
页码:367 / 381
页数:15
相关论文
共 67 条
[41]  
*OIE, VAL CERT DIAGN ASS
[42]  
Osawa Yuko, 2008, Nucleic Acids Symp Ser (Oxf), P23, DOI 10.1093/nass/nrn012
[43]   Development of a novel quantitative real-time RT-PCR assay for the simultaneous detection of all serotypes of Foot-and-mouth disease virus [J].
Rasmussen, TB ;
Uttenthal, Å ;
de Stricker, K ;
Belák, S ;
Storgaard, T .
ARCHIVES OF VIROLOGY, 2003, 148 (10) :2005-2021
[44]  
ROCHE, 454 SEQUENCING
[45]  
Roh KH, 2008, ANN CLIN LAB SCI, V38, P41
[46]   Simultaneous detection of three porcine viruses by multiplex PCR [J].
Sami, L. ;
Ursu, Krisztina ;
Mckillen, J. ;
Kecskemeti, S. ;
Belak, S. ;
Kiss, I. .
ACTA VETERINARIA HUNGARICA, 2007, 55 (02) :267-276
[47]   Global Surveillance of Emerging Influenza Virus Genotypes by Mass Spectrometry [J].
Sampath, Rangarajan ;
Russell, Kevin L. ;
Massire, Christian ;
Eshoo, Mark W. ;
Harpin, Vanessa ;
Blyn, Lawrence B. ;
Melton, Rachael ;
Ivy, Cristina ;
Pennella, Thuy ;
Li, Feng ;
Levene, Harold ;
Hall, Thomas A. ;
Libby, Brian ;
Fan, Nancy ;
Walcott, Demetrius J. ;
Ranken, Raymond ;
Pear, Michael ;
Schink, Amy ;
Gutierrez, Jose ;
Drader, Jared ;
Moore, David ;
Metzgar, David ;
Addington, Lynda ;
Rothman, Richard ;
Gaydos, Charlotte A. ;
Yang, Samuel ;
St. George, Kirsten ;
Fuschino, Meghan E. ;
Dean, Amy B. ;
Stallknecht, David E. ;
Goekjian, Ginger ;
Yingst, Samuel ;
Monteville, Marshall ;
Saad, Magdi D. ;
Whitehouse, Chris A. ;
Baldwin, Carson ;
Rudnick, Karl H. ;
Hofstadler, Steven A. ;
Lemon, Stanley M. ;
Ecker, David J. .
PLOS ONE, 2007, 2 (05)
[48]   Rapid identification of emerging infectious agents using PCR and electrospray ionization mass spectrometry [J].
Sampath, Rangarajan ;
Hall, Thomas A. ;
Massire, Christian ;
Li, Feng ;
Blyn, Lawrence B. ;
Eshoo, Mark W. ;
Hofstadler, Steven A. ;
Ecker, David J. .
BIOLOGY OF EMERGING VIRUSES: SARS, AVIAN AND HUMAN INFLUENZA, METAPNEUMOVIRUS, NIPAH, WEST NILE, AND ROSS RIVER VIRUS, 2007, 1102 :109-120
[49]   Linear-After-The-Exponential (LATE)-PCR: An advanced method of asymmetric PCR and its uses in quantitative real-time analysis [J].
Sanchez, JA ;
Pierce, KE ;
Rice, JE ;
Wangh, LJ .
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, 2004, 101 (07) :1933-1938
[50]   Bluetongue virus:: virology, pathogenesis and immunity [J].
Schwartz-Cornil, Isabelle ;
Mertens, Peter P. C. ;
Contreras, Vanessa ;
Hemati, Behzad ;
Pascale, Florentina ;
Breard, Emmanuel ;
Mellor, Philip S. ;
MacLachlan, N. James ;
Zientara, Stephan .
VETERINARY RESEARCH, 2008, 39 (05)