Two promising future developments of cryo-EM: capturing short-lived states and mapping a continuum of states of a macromolecule

被引:38
|
作者
Chen, Bo [1 ]
Frank, Joachim [1 ,2 ,3 ]
机构
[1] Columbia Univ, Dept Biochem & Mol Biophys, New York, NY 10032 USA
[2] Columbia Univ, Dept Biol Sci, New York, NY 10027 USA
[3] Columbia Univ, Howard Hughes Med Inst, New York, NY 10032 USA
基金
美国国家卫生研究院;
关键词
classification; manifold embedding; microfluidics; ribosome; time-resolved imaging; translation; TRANSFER-RNA; CRYOELECTRON MICROSCOPY; RIBOSOMAL-SUBUNIT; ELECTRON-MICROSCOPY; DYNAMICS; MECHANISM; CLASSIFICATION; TRANSLOCATION; MOVEMENT; IMAGES;
D O I
10.1093/jmicro/dfv344
中图分类号
TH742 [显微镜];
学科分类号
摘要
The capabilities and application range of cryogenic electron microscopy (cryo-EM) method have expanded vastly in the last two years, thanks to the advances provided by direct detection devices and computational classification tools. We take this review as an opportunity to sketch out promising developments of cryo-EM in two important directions: (i) imaging of short-lived states (10-1000 ms) of biological molecules by using time-resolved cryo-EM, particularly the mixing-spraying method and (ii) recovering an entire continuum of coexisting states from the same sample by employing a computational technique called manifold embedding. It is tempting to think of combining these two methods, to elucidate the way the states of a molecular machine such as the ribosome branch and unfold. This idea awaits further developments of both methods, particularly by increasing the data yield of the time-resolved cryo-EM method and by developing the manifold embedding technique into a user-friendly workbench.
引用
收藏
页码:69 / 79
页数:11
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