A random forest algorithm-based approach to capture latent decision variables and their cutoff values

被引:3
作者
Matsuo, Ryosuke [1 ]
Yamazaki, Tomoyoshi [1 ]
Suzuki, Muneou [1 ]
Toyama, Hinako [2 ]
Araki, Kenji [1 ]
机构
[1] Univ Miyazaki Hosp, Fac Med, 5200 Kihara,Kiyotake Cho, Miyazaki, Miyazaki 8891692, Japan
[2] Inst Med Data Sci, 1-10-2 Tsukushino, Abiko, Chiba 2701164, Japan
关键词
Latent decision variables; Cutoff values; Random forests; Phenotype transformation; Clinical laboratory data; Knowledge discovery; FEATURE-SELECTION; THYROID-FUNCTION; REFERENCE RANGE; ANION GAP; CALCIUM; RISK;
D O I
10.1016/j.jbi.2020.103548
中图分类号
TP39 [计算机的应用];
学科分类号
081203 ; 0835 ;
摘要
Although reference intervals (RIs) and clinical decision limits (CDLs) are vital laboratory information for supporting the interpretation of numerical clinical pathology results, there is evidence that RIs and CDLs vary in certain contexts as well as other evidence that RIs and CDLs are flawed. We propose a random forest algorithm-based exploration methodology by using phenotype transformation of independent variables in relation to dependent variables to capture latent decision variables and their cutoff values. We denote certain CDLs within the RIs estimated by an indirect method that affect some diagnostics or outcomes in the context of specific patients' conditions as latent CDLs. We then apply the proposed methodology to clinical laboratory data regarding bodily fluids, such as blood, urine at the admission of patients for the exploration of latent CDLs of hospital length of stay (HLOS) for each patients' condition identified by diseases of patients who undergoing surgeries. From the exploration results, we found that free Thyroxine (T4) above five unique cutoff values: 1.16 ng/dL, 1.19 ng/dL, 1.2 ng/dL, 1.23 ng/dL and 1.25 ng/dL for tachyarrhythmia predicted longer HLOS, though these cutoff values fall within the estimated RIs as well as the hospital-determined RIs. In addition to the evidence that higher free Thyroxine (T4) levels within the RIs have an association with the corresponding disease, on the whole, the cutoff values except 1.16 ng/dL tended to affect long HLOS with the significant differences. The cutoff values could be taken up for discussion among clinical experts whether it is meaningful to alert the risk of patients' conditions and the long HLOS at the admission of patients. If clinical experts appreciate its meaningfulness in clinical practice, the alerts could be embedded in electronic medical records for handling those risks at the admission of patients.
引用
收藏
页数:7
相关论文
共 34 条
[1]  
[Anonymous], 2014, SCIPY OPEN SOURCE SC
[2]  
Arzideh F, 2007, CLIN CHEM LAB MED, V45, P1043, DOI 10.1515/CCLM.2007.250
[3]   Thyroid Function Within the Normal Range, Subclinical Hypothyroidism, and the Risk of Atrial Fibrillation [J].
Baumgartner, Christine ;
da Costa, Bruno R. ;
Collet, Tinh-Hai ;
Feller, Martin ;
Floriani, Carmen ;
Bauer, Douglas C. ;
Cappola, Anne R. ;
Heckbert, Susan R. ;
Ceresini, Graziano ;
Gussekloo, Jacobijn ;
den Elzen, Wendy P. J. ;
Peeters, Robin P. ;
Luben, Robert ;
Voelzke, Henry ;
Doerr, Marcus ;
Walsh, John P. ;
Bremner, Alexandra ;
Iacoviello, Massimo ;
Macfarlane, Peter ;
Heeringa, Jan ;
Stott, David J. ;
Westendorp, Rudi G. J. ;
Khaw, Kay-Tee ;
Magnani, Jared W. ;
Aujesky, Drahomir ;
Rodondi, Nicolas .
CIRCULATION, 2017, 136 (22) :2100-2116
[4]   A SIMPLE METHOD OF RESOLUTION OF A DISTRIBUTION INTO GAUSSIAN COMPONENTS [J].
BHATTACHARYA, CG .
BIOMETRICS, 1967, 23 (01) :115-+
[5]  
Breiman L., 2001, RANDOM FORESTS, V45, P5, DOI DOI 10.1023/A:1010933404324
[6]  
Cataltepe Zehra, 2007, 2007 15th European Signal Processing Conference (EUSIPCO), P970
[7]  
Ceriotti Ferruccio, 2008, EJIFCC, V19, P106
[8]   Normal Thyroid Function and the Risk of Atrial Fibrillation: the Rotterdam Study [J].
Chaker, Layal ;
Heeringa, Jan ;
Dehghan, Abbas ;
Medici, Marco ;
Visser, W. Edward ;
Baumgartner, Christine ;
Hofman, Albert ;
Rodondi, Nicolas ;
Peeters, Robin P. ;
Franco, Oscar H. .
JOURNAL OF CLINICAL ENDOCRINOLOGY & METABOLISM, 2015, 100 (10) :3718-3724
[9]   Anion gap and hypoalbuminemia [J].
Figge, J ;
Jabor, A ;
Kazda, A ;
Fencl, V .
CRITICAL CARE MEDICINE, 1998, 26 (11) :1807-1810
[10]  
Goldstein D.A., 1990, CLIN METHODS HIST PH, Vthird