Minimum Information for Reporting on the Comet Assay (MIRCA): recommendations for describing comet assay procedures and results

被引:264
作者
Moller, Peter [1 ]
Azqueta, Amaya [2 ,3 ]
Boutet-Robinet, Elisa [4 ]
Koppen, Gudrun [5 ]
Bonassi, Stefano [6 ,7 ]
Milic, Mirta [8 ]
Gajski, Goran [8 ]
Costa, Solange [9 ,10 ]
Teixeira, Joao Paulo [9 ,10 ]
Costa Pereira, Cristiana [9 ,10 ]
Dusinska, Maria [11 ]
Godschalk, Roger [12 ]
Brunborg, Gunnar [13 ]
Gutzkow, Kristine B. [13 ]
Giovannelli, Lisa [14 ]
Cooke, Marcus S. [15 ]
Richling, Elke [16 ]
Laffon, Blanca [17 ,18 ]
Valdiglesias, Vanessa [17 ,18 ]
Basaran, Nursen [19 ]
Del Bo', Cristian [20 ]
Zegura, Bojana [21 ]
Novak, Matjaz [21 ]
Stopper, Helga [22 ]
Vodicka, Pavel [23 ,24 ]
Vodenkova, Sona [23 ,24 ]
de Andrade, Vanessa Moraes [25 ]
Sramkova, Monika [26 ]
Gabelova, Alena [26 ]
Collins, Andrew [27 ]
Langie, Sabine A. S. [12 ,28 ]
机构
[1] Univ Copenhagen, Sect Environm Hlth, Dept Publ Hlth, Copenhagen, Denmark
[2] Univ Navarra, Dept Pharmacol & Toxicol, Pamplona, Spain
[3] Navarra Inst Hlth Res, IdiSNA, Pamplona, Spain
[4] Univ Toulouse, INRAE, ENVT, Toxalim Res Ctr Food Toxicol,INP Purpan,UPS, Toulouse, France
[5] VITO Hlth, Mol, Belgium
[6] IRCCS San Raffaele Pisana, Unit Clin & Mol Epidemiol, Rome, Italy
[7] San Raffaele Univ, Dept Human Sci & Qual Life Promot, Rome, Italy
[8] Inst Med Res & Occupat Hlth, Mutagenesis Unit, Zagreb, Croatia
[9] Natl Inst Hlth Dr Ricardo Jorge, Environm Hlth Dept, Porto, Portugal
[10] Univ Porto, Inst Saude Publ, Epidemiol Res Unit EPIUnit, Porto, Portugal
[11] Norwegian Inst Air Res NILU, Dept Environm Chem, Hlth Effects Lab, Kjeller, Norway
[12] Maastricht Univ, Sch Nutr & Translat Res Metab NUTRIM, Dept Pharmacol & Toxicol, Maastricht, Netherlands
[13] Norwegian Inst Publ Hlth Skoyen, Dept Environm Hlth, Sect Mol Toxicol, Oslo, Norway
[14] Univ Florence, Sect Pharmacol & Toxicol, Dept Neurosci Psychol Pharmacol & Child Hlth NEUR, Florence, Italy
[15] Univ S Florida, Dept Cell Biol Microbiol & Mol Biol, Oxidat Stress Grp, Tampa, FL 33620 USA
[16] Univ Kaiserslautern, Dept Chem, Food Chem & Toxicol, Kaiserslautern, Germany
[17] Univ A Coruna, Fac Ciencias Educ, Dept Psicol, Ctr Invest Cient Avanzadas CICA,Grp DICOMOSA, Coruna, Spain
[18] AE CICA INIBIC, Inst Invest Biomed A Coruna INIBIC, Coruna, Spain
[19] Hacettepe Univ, Dept Toxicol, Fac Pharm, Ankara, Turkey
[20] Univ Milan, Dept Food Environm & Nutr Sci DeFENS, Div Human Nutr, Milan, Italy
[21] Natl Inst Biol, Dept Genet Toxicol & Canc Biol, Ljubljana, Slovenia
[22] Univ Wurzburg, Inst Pharmacol & Toxicol, Wurzburg, Germany
[23] Czech Acad Sci, Inst Expt Med, Prague, Czech Republic
[24] Charles Univ Prague, Med Fac Pilsen, Biomed Ctr, Prague, Czech Republic
[25] Univ Southern Santa Catarina, Lab Translat Biomed, UNESC, Criciuma, SC, Brazil
[26] Slovak Acad Sci, Biomed Res Ctr, Canc Res Inst, Dept Nanobiol, Bratislava, Slovakia
[27] Univ Oslo, Dept Nutr, Oslo, Norway
[28] Hasselt Univ, Ctr Environm Sci, Hasselt, Belgium
关键词
INTER-LABORATORY VARIATION; DNA-DAMAGE; ANIMAL-MODELS; CELLS; REPAIR; TIME; MIGRATION; OXIDATION; WHALES; BASE;
D O I
10.1038/s41596-020-0398-1
中图分类号
Q5 [生物化学];
学科分类号
071010 ; 081704 ;
摘要
The comet assay is a widely used test for the detection of DNA damage and repair activity. However, there are interlaboratory differences in reported levels of baseline and induced damage in the same experimental systems. These differences may be attributed to protocol differences, although it is difficult to identify the relevant conditions because detailed comet assay procedures are not always published. Here, we present a Consensus Statement for the Minimum Information for Reporting Comet Assay (MIRCA) providing recommendations for describing comet assay conditions and results. These recommendations differentiate between 'desirable' and 'essential' information: 'essential' information refers to the precise details that are necessary to assess the quality of the experimental work, whereas 'desirable' information relates to technical issues that might be encountered when repeating the experiments. Adherence to MIRCA recommendations should ensure that comet assay results can be easily interpreted and independently verified by other researchers. Here, members of the hCOMET COST Action program provide a consensus statement on the Minimum Information for Reporting Comet Assays (MIRCA).
引用
收藏
页码:3817 / 3826
页数:10
相关论文
共 42 条
[1]   Simplified method for the collection, storage, and comet assay analysis of DNA damage in whole blood [J].
Al-Salmani, Kamla ;
Abbas, Hussein H. K. ;
Schulpen, Sjors ;
Karbaschi, Mahsa ;
Abdalla, Intisar ;
Bowman, Karen J. ;
So, Kwok K. ;
Evans, Mark D. ;
Jones, George D. D. ;
Godschalk, Roger W. ;
Cooke, Marcus S. .
FREE RADICAL BIOLOGY AND MEDICINE, 2011, 51 (03) :719-725
[2]   Applying the comet assay to fresh vs frozen animal solid tissues: A technical approach [J].
Azqueta, A. ;
Enciso, J. M. ;
Pastor, L. ;
Lopez de Cerain, A. ;
Vettorazzi, A. .
FOOD AND CHEMICAL TOXICOLOGY, 2019, 132
[3]   Application of the comet assay in human biomonitoring: An hCOMET perspective [J].
Azqueta, Amaya ;
Ladeira, Carina ;
Giovannelli, Lisa ;
Boutet-Robinet, Elisa ;
Bonassi, Stefano ;
Neri, Monica ;
Gajski, Goran ;
Duthie, Susan ;
Del Bo, Cristian ;
Riso, Patrizia ;
Koppen, Gudrun ;
Basaran, Nursen ;
Collins, Andrew ;
Moller, Peter .
MUTATION RESEARCH-REVIEWS IN MUTATION RESEARCH, 2020, 783
[4]   Technical recommendations to perform the alkaline standard and enzyme-modified comet assay in human biomonitoring studies [J].
Azqueta, Amaya ;
Muruzabal, Damian ;
Boutet-Robinet, Elisa ;
Milic, Mirta ;
Dusinska, Maria ;
Brunborg, Gunnar ;
Moller, Peter ;
Collins, Andrew R. .
MUTATION RESEARCH-GENETIC TOXICOLOGY AND ENVIRONMENTAL MUTAGENESIS, 2019, 843 :24-32
[5]   DNA repair as a human biomonitoring tool: Comet assay approaches [J].
Azqueta, Amaya ;
Langie, Sabine A. S. ;
Boutet-Robinet, Elisa ;
Duthie, Susan ;
Ladeira, Carina ;
Moller, Peter ;
Collins, Andrew R. ;
Godschalk, Roger W. L. .
MUTATION RESEARCH-REVIEWS IN MUTATION RESEARCH, 2019, 781 :71-87
[6]   Measurement of DNA base and nucleotide excision repair activities in mammalian cells and tissues using the comet assay - A methodological overview [J].
Azqueta, Amaya ;
Langie, Sabine A. S. ;
Slyskova, Jana ;
Collins, Andrew R. .
DNA REPAIR, 2013, 12 (11) :1007-1010
[7]   Towards a more reliable comet assay: Optimising agarose concentration, unwinding time and electrophoresis conditions [J].
Azqueta, Amaya ;
Gutzkow, Kristine B. ;
Brunborg, Gunnar ;
Collins, Andrew R. .
MUTATION RESEARCH-GENETIC TOXICOLOGY AND ENVIRONMENTAL MUTAGENESIS, 2011, 724 (1-2) :41-45
[8]   Minimum information about a microarray experiment (MIAME) - toward standards for microarray data [J].
Brazma, A ;
Hingamp, P ;
Quackenbush, J ;
Sherlock, G ;
Spellman, P ;
Stoeckert, C ;
Aach, J ;
Ansorge, W ;
Ball, CA ;
Causton, HC ;
Gaasterland, T ;
Glenisson, P ;
Holstege, FCP ;
Kim, IF ;
Markowitz, V ;
Matese, JC ;
Parkinson, H ;
Robinson, A ;
Sarkans, U ;
Schulze-Kremer, S ;
Stewart, J ;
Taylor, R ;
Vilo, J ;
Vingron, M .
NATURE GENETICS, 2001, 29 (04) :365-371
[9]  
Brunborg Gunnar., 2018, Electrophoresis, DOI [DOI 10.5772/INTECHOPEN.76880, 10.5772/intechopen.76880.]
[10]   The MIQE Guidelines: Minimum Information for Publication of Quantitative Real-Time PCR Experiments [J].
Bustin, Stephen A. ;
Benes, Vladimir ;
Garson, Jeremy A. ;
Hellemans, Jan ;
Huggett, Jim ;
Kubista, Mikael ;
Mueller, Reinhold ;
Nolan, Tania ;
Pfaffl, Michael W. ;
Shipley, Gregory L. ;
Vandesompele, Jo ;
Wittwer, Carl T. .
CLINICAL CHEMISTRY, 2009, 55 (04) :611-622