Rapid diagnosis of turbot reddish body iridovirus in turbot using the loop-mediated isothermal amplification method

被引:42
|
作者
Zhang, Qingli [1 ]
Shi, Chenyin [1 ]
Huang, Jie [1 ]
Jia, Kuntong [1 ]
Chen, Xinhua [2 ]
Liu, Hong [3 ]
机构
[1] Chinese Acad Fishery Sci, Yellow Sea Fisheries Res Inst, Qingdao 266071, Shandong, Peoples R China
[2] State Ocean Adm, Inst Oceanog 3, Key Lab Marine Biogenet Resources, Xiamen 361005, Peoples R China
[3] Tech Ctr Anim & Inspect & Quarantine, Shenzhen Entry Exit Inspect & Quarantine Bur, Shenzhen 518008, Peoples R China
基金
中国国家自然科学基金;
关键词
TRBIV; Detection; Isothermal amplification; LAMP; Turbot; SYNDROME VIRUS; LAMP METHOD; DISEASE; SHRIMP;
D O I
10.1016/j.jviromet.2009.01.008
中图分类号
Q5 [生物化学];
学科分类号
071010 ; 081704 ;
摘要
Turbot reddish body iridovirus (TRBIV) is a new piscine iridovirus that infects the turbot, Scophthalmus maximus, cultured in northern China and can cause high mortality. In this study, a loop-mediated isothermal amplification (LAMP) method was developed for the specific detection of this virus using primers designed from an Msp I restriction DNA fragment of the TRBIV genome. Mg2+ concentrations, the reaction temperature, and the reaction time of LAMP were optimized to 6 mM, 65 degrees C, and 60 min, respectively The detection limit of the LAMP method was as low as seven copies and was 100 times more sensitive than the conventional PCR technique. Visual inspection of LAMP amplifications demonstrated that the positive and negative reactions exhibit distinct and different colors in daylight, which means that gel electrophoresis is not necessary to judge the presence or absence of the virus. LAMP can be conducted in 1 h and requires only a simple heating device for incubation. Thus, the LAMP-TRBIV detection protocol has great potential for use in the detection of TRBIV in both the laboratory and the farm. (c) 2009 Elsevier B.V. All rights reserved.
引用
收藏
页码:18 / 23
页数:6
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