共 15 条
TU-tagging: cell type-specific RNA isolation from intact complex tissues
被引:1
作者:

Miller, Michael R.
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h-index: 0
机构:
Univ Oregon, Howard Hughes Med Inst, Inst Mol Biol, Inst Neurosci, Eugene, OR 97403 USA Univ Oregon, Howard Hughes Med Inst, Inst Mol Biol, Inst Neurosci, Eugene, OR 97403 USA

Robinson, Kristin J.
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Univ Oregon, Howard Hughes Med Inst, Inst Mol Biol, Inst Neurosci, Eugene, OR 97403 USA Univ Oregon, Howard Hughes Med Inst, Inst Mol Biol, Inst Neurosci, Eugene, OR 97403 USA

Cleary, Michael D.
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机构:
Univ Oregon, Howard Hughes Med Inst, Inst Mol Biol, Inst Neurosci, Eugene, OR 97403 USA Univ Oregon, Howard Hughes Med Inst, Inst Mol Biol, Inst Neurosci, Eugene, OR 97403 USA

Doe, Chris Q.
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h-index: 0
机构:
Univ Oregon, Howard Hughes Med Inst, Inst Mol Biol, Inst Neurosci, Eugene, OR 97403 USA Univ Oregon, Howard Hughes Med Inst, Inst Mol Biol, Inst Neurosci, Eugene, OR 97403 USA
机构:
[1] Univ Oregon, Howard Hughes Med Inst, Inst Mol Biol, Inst Neurosci, Eugene, OR 97403 USA
基金:
美国国家卫生研究院;
关键词:
TRANSLATIONAL PROFILING APPROACH;
URACIL PHOSPHORIBOSYLTRANSFERASE;
GENE-EXPRESSION;
DROSOPHILA;
DECAY;
D O I:
10.1038/NMETH.1329
中图分类号:
Q5 [生物化学];
学科分类号:
071010 ;
081704 ;
摘要:
We found that the combination of spatially restricted uracil phosphoribosyltransferase (UPRT) expression with 4-thiouracil delivery can be used to label and purify cell type-specific RNA from intact complex tissues in Drosophila melanogaster. This method is useful for isolating RNA from cell types that are difficult to isolate by dissection or dissociation methods and should work in many organisms, including mammals and other vertebrates.
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页码:439 / U57
页数:5
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共 15 条
[1]
Essential role of the apoptotic cell engulfment genes draper and ced-6 in programmed axon pruning during Drosophila metamorphosis
[J].
Awasaki, T
;
Tatsumi, R
;
Takahashi, K
;
Arai, K
;
Nakanishi, Y
;
Ueda, R
;
Ito, K
.
NEURON,
2006, 50 (06)
:855-867

Awasaki, T
论文数: 0 引用数: 0
h-index: 0
机构: Univ Tokyo, Inst Mol & Cellular Biosci, Bunkyo Ku, Tokyo 1130032, Japan

Tatsumi, R
论文数: 0 引用数: 0
h-index: 0
机构: Univ Tokyo, Inst Mol & Cellular Biosci, Bunkyo Ku, Tokyo 1130032, Japan

Takahashi, K
论文数: 0 引用数: 0
h-index: 0
机构: Univ Tokyo, Inst Mol & Cellular Biosci, Bunkyo Ku, Tokyo 1130032, Japan

Arai, K
论文数: 0 引用数: 0
h-index: 0
机构: Univ Tokyo, Inst Mol & Cellular Biosci, Bunkyo Ku, Tokyo 1130032, Japan

Nakanishi, Y
论文数: 0 引用数: 0
h-index: 0
机构: Univ Tokyo, Inst Mol & Cellular Biosci, Bunkyo Ku, Tokyo 1130032, Japan

Ueda, R
论文数: 0 引用数: 0
h-index: 0
机构: Univ Tokyo, Inst Mol & Cellular Biosci, Bunkyo Ku, Tokyo 1130032, Japan

Ito, K
论文数: 0 引用数: 0
h-index: 0
机构: Univ Tokyo, Inst Mol & Cellular Biosci, Bunkyo Ku, Tokyo 1130032, Japan
[2]
moody Encodes two GPCRs that regulate cocaine behaviors and blood-brain barrier permeability in Drosophila
[J].
Bainton, RJ
;
Tsai, LTY
;
Schwabe, T
;
DeSalvo, M
;
Gaul, U
;
Heberlein, U
.
CELL,
2005, 123 (01)
:145-156

Bainton, RJ
论文数: 0 引用数: 0
h-index: 0
机构:
Univ Calif San Francisco, Dept Anesthesia, San Francisco, CA 94143 USA Univ Calif San Francisco, Dept Anesthesia, San Francisco, CA 94143 USA

Tsai, LTY
论文数: 0 引用数: 0
h-index: 0
机构: Univ Calif San Francisco, Dept Anesthesia, San Francisco, CA 94143 USA

Schwabe, T
论文数: 0 引用数: 0
h-index: 0
机构: Univ Calif San Francisco, Dept Anesthesia, San Francisco, CA 94143 USA

DeSalvo, M
论文数: 0 引用数: 0
h-index: 0
机构: Univ Calif San Francisco, Dept Anesthesia, San Francisco, CA 94143 USA

Gaul, U
论文数: 0 引用数: 0
h-index: 0
机构: Univ Calif San Francisco, Dept Anesthesia, San Francisco, CA 94143 USA

Heberlein, U
论文数: 0 引用数: 0
h-index: 0
机构: Univ Calif San Francisco, Dept Anesthesia, San Francisco, CA 94143 USA
[3]
Biosynthetic labeling of RNA with uracil phosphoribosyltransferase allows cell-specific microarray analysis of mRNA synthesis and decay
[J].
Cleary, MD
;
Meiering, CD
;
Jan, E
;
Guymon, R
;
Boothroyd, JC
.
NATURE BIOTECHNOLOGY,
2005, 23 (02)
:232-237

Cleary, MD
论文数: 0 引用数: 0
h-index: 0
机构: Stanford Univ, Sch Med, Dept Microbiol & Immunol, Stanford, CA 94305 USA

Meiering, CD
论文数: 0 引用数: 0
h-index: 0
机构: Stanford Univ, Sch Med, Dept Microbiol & Immunol, Stanford, CA 94305 USA

Jan, E
论文数: 0 引用数: 0
h-index: 0
机构: Stanford Univ, Sch Med, Dept Microbiol & Immunol, Stanford, CA 94305 USA

Guymon, R
论文数: 0 引用数: 0
h-index: 0
机构: Stanford Univ, Sch Med, Dept Microbiol & Immunol, Stanford, CA 94305 USA

Boothroyd, JC
论文数: 0 引用数: 0
h-index: 0
机构: Stanford Univ, Sch Med, Dept Microbiol & Immunol, Stanford, CA 94305 USA
[4]
High-resolution gene expression profiling for simultaneous kinetic parameter analysis of RNA synthesis and decay
[J].
Doelken, Lars
;
Ruzsics, Zsolt
;
Raedle, Bernd
;
Friedel, Caroline C.
;
Zimmer, Ralf
;
Mages, Joerg
;
Hoffmann, Reinhard
;
Dickinson, Paul
;
Forster, Thorsten
;
Ghazal, Peter
;
Koszinowski, Ulrich H.
.
RNA,
2008, 14 (09)
:1959-1972

Doelken, Lars
论文数: 0 引用数: 0
h-index: 0
机构:
Univ Munich, Max Von Pettenkofer Inst, D-80337 Munich, Germany Univ Munich, Max Von Pettenkofer Inst, D-80337 Munich, Germany

Ruzsics, Zsolt
论文数: 0 引用数: 0
h-index: 0
机构:
Univ Munich, Max Von Pettenkofer Inst, D-80337 Munich, Germany Univ Munich, Max Von Pettenkofer Inst, D-80337 Munich, Germany

Raedle, Bernd
论文数: 0 引用数: 0
h-index: 0
机构:
Univ Munich, Max Von Pettenkofer Inst, D-80337 Munich, Germany Univ Munich, Max Von Pettenkofer Inst, D-80337 Munich, Germany

Friedel, Caroline C.
论文数: 0 引用数: 0
h-index: 0
机构:
Univ Munich, Inst Informat, D-80333 Munich, Germany Univ Munich, Max Von Pettenkofer Inst, D-80337 Munich, Germany

Zimmer, Ralf
论文数: 0 引用数: 0
h-index: 0
机构:
Univ Munich, Inst Informat, D-80333 Munich, Germany Univ Munich, Max Von Pettenkofer Inst, D-80337 Munich, Germany

Mages, Joerg
论文数: 0 引用数: 0
h-index: 0
机构:
Tech Univ Munich, Inst Med Microbiol, D-81675 Munich, Germany Univ Munich, Max Von Pettenkofer Inst, D-80337 Munich, Germany

Hoffmann, Reinhard
论文数: 0 引用数: 0
h-index: 0
机构:
Tech Univ Munich, Inst Med Microbiol, D-81675 Munich, Germany Univ Munich, Max Von Pettenkofer Inst, D-80337 Munich, Germany

Dickinson, Paul
论文数: 0 引用数: 0
h-index: 0
机构:
Univ Edinburgh, Div Pathway Med, Edinburgh EH16 4SB, Midlothian, Scotland
Univ Edinburgh, Ctr Syst Biol, Edinburgh EH16 4SB, Midlothian, Scotland Univ Munich, Max Von Pettenkofer Inst, D-80337 Munich, Germany

论文数: 引用数:
h-index:
机构:

Ghazal, Peter
论文数: 0 引用数: 0
h-index: 0
机构:
Univ Edinburgh, Div Pathway Med, Edinburgh EH16 4SB, Midlothian, Scotland
Univ Edinburgh, Ctr Syst Biol, Edinburgh EH16 4SB, Midlothian, Scotland Univ Munich, Max Von Pettenkofer Inst, D-80337 Munich, Germany

Koszinowski, Ulrich H.
论文数: 0 引用数: 0
h-index: 0
机构:
Univ Munich, Max Von Pettenkofer Inst, D-80337 Munich, Germany Univ Munich, Max Von Pettenkofer Inst, D-80337 Munich, Germany
[5]
Application of a Translational Profiling Approach for the Comparative Analysis of CNS Cell Types
[J].
Doyle, Joseph P.
;
Dougherty, Joseph D.
;
Heiman, Myriam
;
Schmidt, Eric F.
;
Stevens, Tanya R.
;
Ma, Guojun
;
Bupp, Sujata
;
Shrestha, Prerana
;
Shah, Rajiv D.
;
Doughty, Martin L.
;
Gong, Shiaoching
;
Greengard, Paul
;
Heintz, Nathaniel
.
CELL,
2008, 135 (04)
:749-762

Doyle, Joseph P.
论文数: 0 引用数: 0
h-index: 0
机构:
Rockefeller Univ, Howard Hughes Med Inst, Mol Biol Lab, New York, NY 10065 USA Rockefeller Univ, Howard Hughes Med Inst, Mol Biol Lab, New York, NY 10065 USA

Dougherty, Joseph D.
论文数: 0 引用数: 0
h-index: 0
机构:
Rockefeller Univ, Howard Hughes Med Inst, Mol Biol Lab, New York, NY 10065 USA Rockefeller Univ, Howard Hughes Med Inst, Mol Biol Lab, New York, NY 10065 USA

Heiman, Myriam
论文数: 0 引用数: 0
h-index: 0
机构:
Rockefeller Univ, Mol & Cellular Neurosci Lab, New York, NY 10065 USA Rockefeller Univ, Howard Hughes Med Inst, Mol Biol Lab, New York, NY 10065 USA

Schmidt, Eric F.
论文数: 0 引用数: 0
h-index: 0
机构:
Rockefeller Univ, Howard Hughes Med Inst, Mol Biol Lab, New York, NY 10065 USA Rockefeller Univ, Howard Hughes Med Inst, Mol Biol Lab, New York, NY 10065 USA

Stevens, Tanya R.
论文数: 0 引用数: 0
h-index: 0
机构:
Rockefeller Univ, Howard Hughes Med Inst, Mol Biol Lab, New York, NY 10065 USA Rockefeller Univ, Howard Hughes Med Inst, Mol Biol Lab, New York, NY 10065 USA

Ma, Guojun
论文数: 0 引用数: 0
h-index: 0
机构:
Rockefeller Univ, Howard Hughes Med Inst, Mol Biol Lab, New York, NY 10065 USA Rockefeller Univ, Howard Hughes Med Inst, Mol Biol Lab, New York, NY 10065 USA

Bupp, Sujata
论文数: 0 引用数: 0
h-index: 0
机构:
Rockefeller Univ, Howard Hughes Med Inst, Mol Biol Lab, New York, NY 10065 USA Rockefeller Univ, Howard Hughes Med Inst, Mol Biol Lab, New York, NY 10065 USA

Shrestha, Prerana
论文数: 0 引用数: 0
h-index: 0
机构:
Rockefeller Univ, Howard Hughes Med Inst, Mol Biol Lab, New York, NY 10065 USA Rockefeller Univ, Howard Hughes Med Inst, Mol Biol Lab, New York, NY 10065 USA

Shah, Rajiv D.
论文数: 0 引用数: 0
h-index: 0
机构:
Rockefeller Univ, Howard Hughes Med Inst, Mol Biol Lab, New York, NY 10065 USA Rockefeller Univ, Howard Hughes Med Inst, Mol Biol Lab, New York, NY 10065 USA

Doughty, Martin L.
论文数: 0 引用数: 0
h-index: 0
机构:
Rockefeller Univ, GENSAT Project, New York, NY 10065 USA Rockefeller Univ, Howard Hughes Med Inst, Mol Biol Lab, New York, NY 10065 USA

论文数: 引用数:
h-index:
机构:

论文数: 引用数:
h-index:
机构:

Heintz, Nathaniel
论文数: 0 引用数: 0
h-index: 0
机构:
Rockefeller Univ, Howard Hughes Med Inst, Mol Biol Lab, New York, NY 10065 USA
Rockefeller Univ, GENSAT Project, New York, NY 10065 USA Rockefeller Univ, Howard Hughes Med Inst, Mol Biol Lab, New York, NY 10065 USA
[6]
THE DROSOPHILA ANACHRONISM LOCUS - A GLYCOPROTEIN SECRETED BY GLIA INHIBITS NEUROBLAST PROLIFERATION
[J].
EBENS, AJ
;
GARREN, H
;
CHEYETTE, BNR
;
ZIPURSKY, SL
.
CELL,
1993, 74 (01)
:15-27

EBENS, AJ
论文数: 0 引用数: 0
h-index: 0
机构:
UNIV CALIF LOS ANGELES, SCH MED, INST MOLEC BIOL, LOS ANGELES, CA 90024 USA UNIV CALIF LOS ANGELES, SCH MED, INST MOLEC BIOL, LOS ANGELES, CA 90024 USA

GARREN, H
论文数: 0 引用数: 0
h-index: 0
机构:
UNIV CALIF LOS ANGELES, SCH MED, INST MOLEC BIOL, LOS ANGELES, CA 90024 USA UNIV CALIF LOS ANGELES, SCH MED, INST MOLEC BIOL, LOS ANGELES, CA 90024 USA

CHEYETTE, BNR
论文数: 0 引用数: 0
h-index: 0
机构:
UNIV CALIF LOS ANGELES, SCH MED, INST MOLEC BIOL, LOS ANGELES, CA 90024 USA UNIV CALIF LOS ANGELES, SCH MED, INST MOLEC BIOL, LOS ANGELES, CA 90024 USA

ZIPURSKY, SL
论文数: 0 引用数: 0
h-index: 0
机构:
UNIV CALIF LOS ANGELES, SCH MED, INST MOLEC BIOL, LOS ANGELES, CA 90024 USA UNIV CALIF LOS ANGELES, SCH MED, INST MOLEC BIOL, LOS ANGELES, CA 90024 USA
[7]
A Translational Profiling Approach for the Molecular Characterization of CNS Cell Types
[J].
Heiman, Myriam
;
Schaefer, Anne
;
Gong, Shiaoching
;
Peterson, Jayms D.
;
Day, Michelle
;
Ramsey, Keri E.
;
Suarez-farinas, Mayte
;
Schwarz, Cordelia
;
Stephan, Dietrich A.
;
Surmeier, D. James
;
Greengard, Paul
;
Heintz, Nathaniel
.
CELL,
2008, 135 (04)
:738-748

Heiman, Myriam
论文数: 0 引用数: 0
h-index: 0
机构:
Rockefeller Univ, Mol & Cellular Neurosci Lab, New York, NY 10065 USA Rockefeller Univ, GENSAT Project, New York, NY 10065 USA

Schaefer, Anne
论文数: 0 引用数: 0
h-index: 0
机构:
Rockefeller Univ, Mol & Cellular Neurosci Lab, New York, NY 10065 USA Rockefeller Univ, GENSAT Project, New York, NY 10065 USA

论文数: 引用数:
h-index:
机构:

Peterson, Jayms D.
论文数: 0 引用数: 0
h-index: 0
机构:
Northwestern Univ, Dept Physiol, Feinberg Sch Med, Chicago, IL 60611 USA Rockefeller Univ, GENSAT Project, New York, NY 10065 USA

Day, Michelle
论文数: 0 引用数: 0
h-index: 0
机构:
Northwestern Univ, Dept Physiol, Feinberg Sch Med, Chicago, IL 60611 USA Rockefeller Univ, GENSAT Project, New York, NY 10065 USA

Ramsey, Keri E.
论文数: 0 引用数: 0
h-index: 0
机构:
Translat Genom Res Inst, Neurogenom Div, Phoenix, AZ 85004 USA Rockefeller Univ, GENSAT Project, New York, NY 10065 USA

Suarez-farinas, Mayte
论文数: 0 引用数: 0
h-index: 0
机构:
Rockefeller Univ, Rockefeller Univ Hosp, New York, NY 10065 USA Rockefeller Univ, GENSAT Project, New York, NY 10065 USA

Schwarz, Cordelia
论文数: 0 引用数: 0
h-index: 0
机构:
Rockefeller Univ, Howard Hughes Med Inst, Mol Biol Lab, New York, NY 10065 USA Rockefeller Univ, GENSAT Project, New York, NY 10065 USA

Stephan, Dietrich A.
论文数: 0 引用数: 0
h-index: 0
机构:
Translat Genom Res Inst, Neurogenom Div, Phoenix, AZ 85004 USA Rockefeller Univ, GENSAT Project, New York, NY 10065 USA

Surmeier, D. James
论文数: 0 引用数: 0
h-index: 0
机构:
Northwestern Univ, Dept Physiol, Feinberg Sch Med, Chicago, IL 60611 USA Rockefeller Univ, GENSAT Project, New York, NY 10065 USA

论文数: 引用数:
h-index:
机构:

Heintz, Nathaniel
论文数: 0 引用数: 0
h-index: 0
机构:
Rockefeller Univ, GENSAT Project, New York, NY 10065 USA
Rockefeller Univ, Howard Hughes Med Inst, Mol Biol Lab, New York, NY 10065 USA Rockefeller Univ, GENSAT Project, New York, NY 10065 USA
[8]
Probing the transcriptome of neuronal cell types
[J].
Nelson, Sacha B.
;
Hempel, Chris
;
Sugino, Ken
.
CURRENT OPINION IN NEUROBIOLOGY,
2006, 16 (05)
:571-576

Nelson, Sacha B.
论文数: 0 引用数: 0
h-index: 0
机构: Brandeis Univ, Dept Biol, Waltham, MA 02454 USA

Hempel, Chris
论文数: 0 引用数: 0
h-index: 0
机构: Brandeis Univ, Dept Biol, Waltham, MA 02454 USA

Sugino, Ken
论文数: 0 引用数: 0
h-index: 0
机构: Brandeis Univ, Dept Biol, Waltham, MA 02454 USA
[9]
A dermal HOX transcriptional program regulates site-specific epidermal fate
[J].
Rinn, John L.
;
Wang, Jordon K.
;
Allen, Nancy
;
Brugmann, Samantha A.
;
Mikels, Amanda J.
;
Liu, Helen
;
Ridky, Todd W.
;
Stadler, H. Scott
;
Nusse, Roel
;
Helms, Jill A.
;
Chang, Howard Y.
.
GENES & DEVELOPMENT,
2008, 22 (03)
:303-307

Rinn, John L.
论文数: 0 引用数: 0
h-index: 0
机构:
Stanford Univ, Sch Med, Program Epithelial Biol, Stanford, CA 94305 USA Stanford Univ, Sch Med, Program Epithelial Biol, Stanford, CA 94305 USA

Wang, Jordon K.
论文数: 0 引用数: 0
h-index: 0
机构:
Stanford Univ, Sch Med, Program Epithelial Biol, Stanford, CA 94305 USA
Stanford Univ, Sch Med, Canc Biol Program, Stanford, CA 94305 USA Stanford Univ, Sch Med, Program Epithelial Biol, Stanford, CA 94305 USA

Allen, Nancy
论文数: 0 引用数: 0
h-index: 0
机构:
Stanford Univ, Sch Med, Dept Surg, Stanford, CA 94305 USA Stanford Univ, Sch Med, Program Epithelial Biol, Stanford, CA 94305 USA

Brugmann, Samantha A.
论文数: 0 引用数: 0
h-index: 0
机构:
Stanford Univ, Sch Med, Dept Surg, Stanford, CA 94305 USA Stanford Univ, Sch Med, Program Epithelial Biol, Stanford, CA 94305 USA

Mikels, Amanda J.
论文数: 0 引用数: 0
h-index: 0
机构:
Stanford Univ, Sch Med, Canc Biol Program, Stanford, CA 94305 USA
Stanford Univ, Sch Med, Dept Dev Biol, Stanford, CA 94305 USA Stanford Univ, Sch Med, Program Epithelial Biol, Stanford, CA 94305 USA

Liu, Helen
论文数: 0 引用数: 0
h-index: 0
机构:
Stanford Univ, Sch Med, Program Epithelial Biol, Stanford, CA 94305 USA Stanford Univ, Sch Med, Program Epithelial Biol, Stanford, CA 94305 USA

Ridky, Todd W.
论文数: 0 引用数: 0
h-index: 0
机构:
Stanford Univ, Sch Med, Program Epithelial Biol, Stanford, CA 94305 USA Stanford Univ, Sch Med, Program Epithelial Biol, Stanford, CA 94305 USA

Stadler, H. Scott
论文数: 0 引用数: 0
h-index: 0
机构:
Shriners Hosp Children, Div Res, Portland, OR 97239 USA Stanford Univ, Sch Med, Program Epithelial Biol, Stanford, CA 94305 USA

Nusse, Roel
论文数: 0 引用数: 0
h-index: 0
机构:
Stanford Univ, Sch Med, Howard Hughes Med Inst, Stanford, CA 94305 USA
Stanford Univ, Sch Med, Dept Dev Biol, Stanford, CA 94305 USA Stanford Univ, Sch Med, Program Epithelial Biol, Stanford, CA 94305 USA

Helms, Jill A.
论文数: 0 引用数: 0
h-index: 0
机构:
Stanford Univ, Sch Med, Dept Surg, Stanford, CA 94305 USA Stanford Univ, Sch Med, Program Epithelial Biol, Stanford, CA 94305 USA

Chang, Howard Y.
论文数: 0 引用数: 0
h-index: 0
机构:
Stanford Univ, Sch Med, Program Epithelial Biol, Stanford, CA 94305 USA
Stanford Univ, Sch Med, Canc Biol Program, Stanford, CA 94305 USA Stanford Univ, Sch Med, Program Epithelial Biol, Stanford, CA 94305 USA
[10]
Chromosomal clustering of muscle-expressed genes in Caenorhabditis elegans
[J].
Roy, PJ
;
Stuart, JM
;
Lund, J
;
Kim, SK
.
NATURE,
2002, 418 (6901)
:975-979

Roy, PJ
论文数: 0 引用数: 0
h-index: 0
机构: Stanford Univ, Med Ctr, Dept Dev Biol, Stanford, CA 94305 USA

Stuart, JM
论文数: 0 引用数: 0
h-index: 0
机构: Stanford Univ, Med Ctr, Dept Dev Biol, Stanford, CA 94305 USA

Lund, J
论文数: 0 引用数: 0
h-index: 0
机构: Stanford Univ, Med Ctr, Dept Dev Biol, Stanford, CA 94305 USA

Kim, SK
论文数: 0 引用数: 0
h-index: 0
机构:
Stanford Univ, Med Ctr, Dept Dev Biol, Stanford, CA 94305 USA Stanford Univ, Med Ctr, Dept Dev Biol, Stanford, CA 94305 USA