Hepatitis E virus ORF1 encoded non structural protein-host protein interaction network

被引:13
作者
Ojha, Nishant Kumar [1 ]
Lole, Kavita S. [1 ]
机构
[1] Natl Inst Virol, Hepatitis Div, Microbial Containment Complex,Sus Rd, Pune 411021, Maharashtra, India
关键词
Yeast two hybrid; Virus-host interaction; Gene Ontology; SCALE MAP; REPLICATION; GENE; INFECTION; PATHWAY; CLASSIFICATION; LOCALIZATION; EXPRESSION; PRODUCT; ENZYME;
D O I
10.1016/j.virusres.2015.12.007
中图分类号
Q93 [微生物学];
学科分类号
071005 ; 100705 ;
摘要
Hepatitis E virus ORF1 encoded non-structural polyprotein (nsP) consist of multiple domains, namely: Methyltransferase, Y-domain, Protease, X-domain, Helicase and RNA dependent RNA polymerase. We have attempted to identify human liver cell proteins that are interacting with HEV ORF1 encoded functional domains by using Y2H screening. A total of 155 protein-protein interactions between HEV-ORF1 and human proteins were identified. Comparative analysis of the HEV-ORF1-Human interaction network with reconstructed human interactome showed that the cellular proteins interacting with HEV-ORF1 are central and interconnected. Enrichment analysis of Gene Ontology and cellular pathways showed that the viral proteins preferentially interacted with the proteins of metabolism and energy generation along with host immune response and ubiquitin proteasomal pathways. The mTOR and focal adhesion pathways were also targeted by the virus. These interactions suggest that HEV probably utilizes important proteins in carbohydrate metabolism, energy generation and iron homoeostasis in the host cells during its establishment. (C) 2015 Elsevier B.V. All rights reserved.
引用
收藏
页码:195 / 204
页数:10
相关论文
共 61 条
[31]   INCIDENCE AND SEVERITY OF VIRAL-HEPATITIS IN PREGNANCY [J].
KHUROO, MS ;
TELI, MR ;
SKIDMORE, S ;
SOFI, MA ;
KHUROO, MI .
AMERICAN JOURNAL OF MEDICINE, 1981, 70 (02) :252-255
[32]   COMPUTER-ASSISTED ASSIGNMENT OF FUNCTIONAL DOMAINS IN THE NONSTRUCTURAL POLYPROTEIN OF HEPATITIS-E VIRUS - DELINEATION OF AN ADDITIONAL GROUP OF POSITIVE-STRAND RNA PLANT AND ANIMAL VIRUSES [J].
KOONIN, EV ;
GORBALENYA, AE ;
PURDY, MA ;
ROZANOV, MN ;
REYES, GR ;
BRADLEY, DW .
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, 1992, 89 (17) :8259-8263
[33]  
MacFarlane Stuart A., 2008, V451, P649, DOI 10.1007/978-1-59745-102-4_44
[34]   Virus-specific mRNA capping enzyme encoded by hepatitis E virus [J].
Magden, J ;
Takeda, N ;
Li, TC ;
Auvinen, P ;
Ahola, T ;
Miyamura, T ;
Merits, A ;
Kääriäinen, L .
JOURNAL OF VIROLOGY, 2001, 75 (14) :6249-6255
[35]   Activation of the N-Ras-PI3K-Akt-mTOR pathway by hepatitis C virus:: Control of cell survival and viral replication [J].
Mannová, P ;
Beretta, L .
JOURNAL OF VIROLOGY, 2005, 79 (14) :8742-8749
[36]   Metabonomic analysis of hepatitis E patients shows deregulated metabolic cycles and abnormalities in amino acid metabolism [J].
Munshi, S. U. ;
Taneja, S. ;
Bhavesh, N. S. ;
Shastri, J. ;
Aggarwal, R. ;
Jameel, S. .
JOURNAL OF VIRAL HEPATITIS, 2011, 18 (10) :E591-E602
[37]   Changes in gene expression in liver tissue from patients with fulminant hepatitis E [J].
Naik, Anshu ;
Goel, Amit ;
Agrawal, Vinita ;
Sarangi, Aditya N. ;
Chhavi, Nanda ;
Singh, Vineeta ;
Jameel, Shahid ;
Aggarwal, Rakesh .
WORLD JOURNAL OF GASTROENTEROLOGY, 2015, 21 (26) :8032-8042
[38]   Hepatitis E Virus Inhibits Type I Interferon Induction by ORF1 Products [J].
Nan, Yuchen ;
Yu, Ying ;
Ma, Zexu ;
Khattar, Sunil K. ;
Fredericksen, Brenda ;
Zhang, Yan-Jin .
JOURNAL OF VIROLOGY, 2014, 88 (20) :11924-11932
[39]   Molecular interaction databases [J].
Orchard, Sandra .
PROTEOMICS, 2012, 12 (10) :1656-1662
[40]   Hepatitis E virus (HEV) protease: a chymotrypsin-like enzyme that processes both non-structural (pORF1) and capsid (pORF2) protein [J].
Paliwal, Daizy ;
Panda, Subrat Kumar ;
Kapur, Neeraj ;
Varma, Satya Pavan Kumar ;
Durgapal, Hemlata .
JOURNAL OF GENERAL VIROLOGY, 2014, 95 :1689-1700