Amide Neighbouring-Group Effects in Peptides: Phenylalanine as Relay Amino Acid in Long-Distance Electron Transfer

被引:27
作者
Nathanael, Joses G. [1 ]
Gamon, Luke F. [1 ]
Cordes, Meike [2 ]
Rablen, Paul R. [3 ]
Bally, Thomas [4 ]
Fromm, Katharina M. [4 ]
Giese, Bernd [4 ]
Wille, Uta [1 ]
机构
[1] Univ Melbourne, Sch Chem, Inst Bio21, 30 Flemington Rd, Parkville, Vic 3010, Australia
[2] Univ Basel, Dept Chem, St Johanns Ring 19, CH-4056 Basel, Switzerland
[3] Swarthmore Coll, Dept Chem & Biochem, 500 Coll Ave, Swarthmore, PA 19081 USA
[4] Univ Fribourg, Dept Chem, Chemin Musee 9, CH-1700 Fribourg, Switzerland
基金
澳大利亚研究理事会; 瑞士国家科学基金会;
关键词
density functional calculations; electron transfer; kinetics; neighboring-group effects; peptides; radical cations; OXIDANT NO3-CENTER-DOT; BIOLOGICAL OXIDATION; PROTEINS; DAMAGE; PARTICIPATION; DERIVATIVES; MECHANISMS; METHIONINE; RELEVANCE; DYNAMICS;
D O I
10.1002/cbic.201800098
中图分类号
Q5 [生物化学]; Q7 [分子生物学];
学科分类号
071010 ; 081704 ;
摘要
In nature, proteins serve as media for long-distance electron transfer (ET) to carry out redox reactions in distant compartments. This ET occurs either by a single-step superexchange or through a multi-step charge hopping process, which uses side chains of amino acids as stepping stones. In this study we demonstrate that Phe can act as a relay amino acid for long-distance electron hole transfer through peptides. The considerably increased susceptibility of the aromatic ring to oxidation is caused by the lone pairs of neighbouring amide carbonyl groups, which stabilise the Phe radical cation. This neighbouring-amide-group effect helps improve understanding of the mechanism of extracellular electron transfer through conductive protein filaments (pili) of anaerobic bacteria during mineral respiration.
引用
收藏
页码:922 / 926
页数:5
相关论文
共 41 条
[1]   ABSORPTION SPECTRA OF DIMER CATIONS .2. BENZENE DERIVATIVES [J].
BADGER, B ;
BROCKLEH.B .
TRANSACTIONS OF THE FARADAY SOCIETY, 1969, 65 (562P) :2582-&
[2]   Dynamics in electron transfer protein complexes [J].
Bashir, Qamar ;
Scanu, Sandra ;
Ubbink, Marcellus .
FEBS JOURNAL, 2011, 278 (09) :1391-1400
[3]   Long-range charge hopping in DNA [J].
Bixon, M ;
Giese, B ;
Wessely, S ;
Langenbacher, T ;
Michel-Beyerle, ME ;
Jortner, J .
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, 1999, 96 (21) :11713-11716
[4]  
Cordes M., 2008, ANGEW CHEM, V120, P3511
[5]   Influence of amino acid side chains on long-distance electron transfer in peptides:: Electron hopping via "Stepping Stones" [J].
Cordes, Meike ;
Koettgen, Angnieszka ;
Jasper, Christian ;
Jacques, Olivier ;
Boudebous, Hassen ;
Giese, Bernd .
ANGEWANDTE CHEMIE-INTERNATIONAL EDITION, 2008, 47 (18) :3461-3463
[6]   ONE-ELECTRON OXIDATION OF ALKYLBENZENES IN ACETONITRILE BY PHOTOCHEMICALLY PRODUCED NO3. - EVIDENCE FOR AN INNER-SPHERE MECHANISM [J].
DEL GIACCO, T ;
BACIOCCHI, E ;
STEENKEN, S .
JOURNAL OF PHYSICAL CHEMISTRY, 1993, 97 (21) :5451-5456
[7]   Structural and functional insights into the conductive pili of Geobacter sulfurreducens revealed in molecular dynamics simulations [J].
Feliciano, G. T. ;
Steidl, R. J. ;
Reguera, G. .
PHYSICAL CHEMISTRY CHEMICAL PHYSICS, 2015, 17 (34) :22217-22226
[8]   Oxidative Damage of Biomolecules by the Environmental Pollutants NO2• and NO3• [J].
Gamon, Luke F. ;
Wille, Uta .
ACCOUNTS OF CHEMICAL RESEARCH, 2016, 49 (10) :2136-2145
[9]   Electron Transfer in Peptides: The Influence of Charged Amino Acids [J].
Gao, Jian ;
Mueller, Pavel ;
Wang, Min ;
Eckhardt, Sonja ;
Lauz, Miriam ;
Fromm, Katharina M. ;
Giese, Bernd .
ANGEWANDTE CHEMIE-INTERNATIONAL EDITION, 2011, 50 (08) :1926-1930
[10]   Direct observation of hole transfer through DNA by hopping between adenine bases and by tunnelling [J].
Giese, B ;
Amaudrut, J ;
Köhler, AK ;
Spormann, M ;
Wessely, S .
NATURE, 2001, 412 (6844) :318-320