TFBS: Computational framework for transcription factor binding site analysis

被引：132

作者：

Lenhard, B ^{[1
]}

Wasserman, WW ^{[1
]}

机构：

[1] Karolinska Inst, Ctr Genom & Bioinformat, Bioinformat Unit, Stockholm, Sweden

来源：

BIOINFORMATICS | 2002年 / 18卷 / 08期

关键词：

D O I：

10.1093/bioinformatics/18.8.1135

中图分类号：

Q5 [生物化学];

学科分类号：

071010 ; 081704 ;

摘要：

TFBS is a set of integrated, object-oriented Perl modules for transcription factor binding site detection and analysis. It implements objects representing specificity profile matrices, binding sites and sets thereof, pattern generators, and pattern database interfaces. The modules are interoperable with the BioPerl open source system.

引用

页码：1135 / 1136

页数：2

共 8 条

[1]

Arnone MI, 1997, DEVELOPMENT, V124, P1851

[2] SELECTION OF DNA-BINDING SITES BY REGULATORY PROTEINS [J].