Development of an in vivo fluorescence based gene expression reporter system for Clostridium tyrobutyricum

被引:13
作者
Cheng, Chi [1 ,2 ]
Lin, Meng [3 ]
Jiang, Wenyan [2 ]
Zhao, Jingbo [2 ]
Li, Weiming [2 ,4 ]
Yang, Shang-Tian [2 ]
机构
[1] Dalian Univ Technol, Sch Bioengn, Dalian 116024, Peoples R China
[2] Ohio State Univ, William G Lowrie Dept Chem & Biomol Engn, 151 Woodruff Ave, Columbus, OH 43210 USA
[3] Bioproc Innovat Co, 4734 Bridle Path Ct, Dublin, OH 43017 USA
[4] Harbin Inst Technol, Sch Environm, Harbin 150090, Heilongjiang, Peoples R China
基金
美国国家科学基金会;
关键词
Clostridium tyrobutyricum; Fluorescent protein; Gene expression; Promoter screening; Thiolase; N-BUTANOL PRODUCTION; BAGASSE HYDROLYSATE; BUTYRIC-ACID; PROTEIN; ACETOBUTYLICUM; FERMENTATION; BEIJERINCKII; TOLERANCE; GLUCOSE; STRAIN;
D O I
10.1016/j.jbiotec.2019.08.019
中图分类号
Q81 [生物工程学(生物技术)]; Q93 [微生物学];
学科分类号
071005 ; 0836 ; 090102 ; 100705 ;
摘要
C. tyrobutyricum, an acidogenic Clostridium, has aroused increasing interest due to its potential to produce biofuel efficiently. However, construction of recombinant C. tyrobutyricum for enhanced biofuel production has been impeded by the limited genetic engineering tools. In this study, a flavin mononucleotide (FMN)-dependent fluorescent protein Bs2-based gene expression reporter system was developed to monitor transformation and explore in vivo strength and regulation of various promoters in C. tyrobutyricum and C. acetobutylicum. Unlike green fluorescent protein (GFP) and its variants, Bs2 can emit green light without oxygen, which makes it extremely suitable for promoter screening and transformation confirmation in organisms grown anaerobically. The expression levels of bs2 under thiolase promoters from C. tyrobutyricum and C. acetobutylicum were measured and compared based on fluorescence intensities. The capacities of the two promoters in driving secondary alcohol dehydrogenase (adh) gene for isopropanol production in C. tyrobutyricum were distinguished, confirming that this reporter system is a convenient, effective and reliable tool for promoter strength assay and real time monitoring in C. tyrobutyricum, while demonstrating the feasibility of producing isopropanol in C. tyrobutyricum for the first time.
引用
收藏
页码:18 / 22
页数:5
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[1]   Extending CRISPR-Cas9 Technology from Genome Editing to Transcriptional Engineering in the Genus Clostridium [J].
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Fagan, Robert P. ;
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Christie, John M. ;
Fairweather, Neil F. ;
Douce, Gillian R. .
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[3]   Engineering Clostridium organisms as microbial cell-factories: challenges & opportunities [J].
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[5]   Metabolic engineering of Clostridium carboxidivorans for enhanced ethanol and butanol production from syngas and glucose [J].
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[6]   Structural Tuning of the Fluorescent Protein iLOV for Improved Photostability [J].
Christie, John M. ;
Hitomi, Kenichi ;
Arvai, Andrew S. ;
Hartfield, Kimberly A. ;
Mettlen, Marcel ;
Pratt, Ashley J. ;
Tainer, John A. ;
Getzoff, Elizabeth D. .
JOURNAL OF BIOLOGICAL CHEMISTRY, 2012, 287 (26) :22295-22304
[7]   Reporter proteins for in vivo fluorescence without oxygen [J].
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Eggert, Thorsten ;
Circolone, Franco ;
Heck, Achim ;
Krauss, Ulrich ;
Guterl, Jan-Karl ;
Wendorff, Marion ;
Losi, Aba ;
Gaertner, Wolfgang ;
Jaeger, Karl-Erich .
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Huber, Robert ;
Heck, Achim ;
Circolone, Franco ;
Hillmer, Anne-Kathrin ;
Buechs, Jochen ;
Jaeger, Karl-Erich .
APPLIED AND ENVIRONMENTAL MICROBIOLOGY, 2010, 76 (17) :5990-5994
[9]   Metabolic Process Engineering of Clostridium tyrobutyricum Δack-adhE2 for Enhanced n-butanol Production From Glucose: Effects of Methyl Viologen on NADH Availability, Flux Distribution, and Fermentation Kinetics [J].
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Jiang, Wenyan ;
Yu, Mingrui ;
Tang, I-Ching ;
Yang, Shang-Tian .
BIOTECHNOLOGY AND BIOENGINEERING, 2015, 112 (04) :705-715
[10]   Express Your LOV: An Engineered Flavoprotein as a Reporter for Protein Expression and Purification [J].
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Beckham, Katherine S. H. ;
Christie, John M. ;
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