Association Between Four Polymorphisms in lncRNA and Risk of Lung Cancer in a Chinese Never-Smoking Female Population

被引:7
作者
Gao, Min [1 ]
Li, Hang [1 ]
Lv, Xiaoting [1 ]
Zhou, Baosen [1 ,2 ]
Yin, Zhihua [1 ,2 ]
机构
[1] China Med Univ, Sch Publ Hlth, Dept Epidemiol, 77 Puhe Rd, Shenyang 110122, Liaoning, Peoples R China
[2] Univ Liaoning Prov, Key Lab Canc Etiol & Intervent, Shenyang, Liaoning, Peoples R China
关键词
lung cancer; long noncoding RNA; single nucleotide polymorphism; genetic susceptibility; gene-environment interaction; SINGLE-NUCLEOTIDE POLYMORPHISMS; BREAST-CANCER; COOKING; WOMEN; LOCI; TOX3; STATISTICS; CHROMATIN; VARIANTS; GENOMICS;
D O I
10.1089/dna.2018.4200
中图分类号
Q5 [生物化学]; Q7 [分子生物学];
学科分类号
071010 ; 081704 ;
摘要
Long noncoding RNAs (lncRNAs) play important roles in the development of human cancers. This is the first case-control study of the association between specific polymorphisms in lncRNA genes and the risk of lung cancer, as well as the gene-environment interaction between the polymorphisms and cooking oil fume exposure in Chinese never-smoking females. A hospital-based case-control study was carried out in Shenyang, Liaoning province. The study included 395 cases and 556 controls. The polymorphisms of rs4785367, rs3803662, rs10750417, and rs1814343 in lncRNA genes were analyzed. The gene-environment interactions were explored on both additive and multiplicative scale. In addition, the results were listed as follows: for rs3803662, compared with the individuals carrying homozygous TT genotype, those with homozygous CC genotype had the decreased risk of lung cancer (adjusted odds ratio [OR]=0.61, 95% confidence interval [CI]=0.40-0.92, p=0.018). As for rs4785367, compared with homozygous TT, homozygous CC could lessen the risk of lung cancer (adjusted OR=0.54, 95% CI=0.33-0.89, p=0.016). The recessive models of rs3803662 and rs4785367 showed significant association (adjusted OR=0.65, 95% CIs=0.44-0.97, p=0.033; adjusted OR=0.54, 95% CIs=0.33-0.88, p=0.014). The C allele of rs3803662 was suggested to be protective allele of lung cancer (adjusted OR=0.80, 95% CI=0.66-0.97, p=0.023). However, rs10750417 and rs1814343 polymorphisms were not significantly associated with lung cancer risks. The measures of additive interaction and logistic models suggested that the gene-environment interactions were not statistically significant on both additive and multiplicative scales.
引用
收藏
页码:651 / 658
页数:8
相关论文
共 37 条
[1]   Interaction: A word with two meanings creates confusion [J].
Ahlbom, A ;
Alfredsson, L .
EUROPEAN JOURNAL OF EPIDEMIOLOGY, 2005, 20 (07) :563-564
[2]  
Barnett R, 2012, METHODS MOL BIOL, V840, P13, DOI 10.1007/978-1-61779-516-9_2
[3]   Cancer Statistics in China, 2015 [J].
Chen, Wanqing ;
Zheng, Rongshou ;
Baade, Peter D. ;
Zhang, Siwei ;
Zeng, Hongmei ;
Bray, Freddie ;
Jemal, Ahmedin ;
Yu, Xue Qin ;
He, Jie .
CA-A CANCER JOURNAL FOR CLINICIANS, 2016, 66 (02) :115-132
[4]   Quantitative assessment of polymorphisms in H19 lncRNA and cancer risk: a meta-analysis of 13,392 cases and 18,893 controls [J].
Chu, Minjie ;
Yuan, Weiyan ;
Wu, Shuangshuang ;
Wang, Zhiquan ;
Mao, Liping ;
Tian, Tian ;
Lu, Yihua ;
Zhu, Bowen ;
Yang, Yue ;
Wang, Bin ;
Gao, Haiquan ;
Jiang, Liying ;
Zhuang, Xun .
ONCOTARGET, 2016, 7 (48) :78631-78639
[5]   Lung cancer in never smokers - A review [J].
Couraud, Sebastien ;
Zalcman, Gerard ;
Milleron, Bernard ;
Morin, Franck ;
Souquet, Pierre-Jean .
EUROPEAN JOURNAL OF CANCER, 2012, 48 (09) :1299-1311
[6]   Breast cancer risk-associated SNPs modulate the affinity of chromatin for FOXA1 and alter gene expression [J].
Cowper-Sal-lari, Richard ;
Zhang, Xiaoyang ;
Wright, Jason B. ;
Bailey, Swneke D. ;
Cole, Michael D. ;
Eeckhoute, Jerome ;
Moore, Jason H. ;
Lupien, Mathieu .
NATURE GENETICS, 2012, 44 (11) :1191-1198
[7]   The GENCODE v7 catalog of human long noncoding RNAs: Analysis of their gene structure, evolution, and expression [J].
Derrien, Thomas ;
Johnson, Rory ;
Bussotti, Giovanni ;
Tanzer, Andrea ;
Djebali, Sarah ;
Tilgner, Hagen ;
Guernec, Gregory ;
Martin, David ;
Merkel, Angelika ;
Knowles, David G. ;
Lagarde, Julien ;
Veeravalli, Lavanya ;
Ruan, Xiaoan ;
Ruan, Yijun ;
Lassmann, Timo ;
Carninci, Piero ;
Brown, James B. ;
Lipovich, Leonard ;
Gonzalez, Jose M. ;
Thomas, Mark ;
Davis, Carrie A. ;
Shiekhattar, Ramin ;
Gingeras, Thomas R. ;
Hubbard, Tim J. ;
Notredame, Cedric ;
Harrow, Jennifer ;
Guigo, Roderic .
GENOME RESEARCH, 2012, 22 (09) :1775-1789
[8]   TOX3 is a neuronal survival factor that induces transcription depending on the presence of CITED1 or phosphorylated CREB in the transcriptionally active complex [J].
Dittmer, Sonja ;
Kovacs, Zsuzsa ;
Yuan, Shauna H. ;
Siszler, Gabriella ;
Koegl, Manfred ;
Summer, Holger ;
Geerts, Andreas ;
Golz, Stefan ;
Shioda, Toshi ;
Methner, Axel .
JOURNAL OF CELL SCIENCE, 2011, 124 (02) :252-260
[9]   Association of genetic variants at TOX3, 2q35 and 8q24 with the risk of familial and early-onset breast cancer in a South-American population [J].
Elematore, Isabel ;
Gonzalez-Hormazabal, Patricio ;
Reyes, Jose M. ;
Blanco, Rafael ;
Bravo, Teresa ;
Peralta, Octavio ;
Gomez, Fernando ;
Waugh, Enrique ;
Margarit, Sonia ;
Ibanez, Gladys ;
Romero, Carmen ;
Pakomio, Janara ;
Roizen, Gigia ;
Di Capua, Gabriella A. ;
Jara, Lilian .
MOLECULAR BIOLOGY REPORTS, 2014, 41 (06) :3715-3722
[10]   Discriminatory accuracy from single-nucleotide polymorphisms in models to predict breast cancer risk [J].
Gail, Mitchell H. .
JOURNAL OF THE NATIONAL CANCER INSTITUTE, 2008, 100 (14) :1037-1041