Microsatellites: Simple sequences with complex evolution

被引:1616
作者
Ellegren, H [1 ]
机构
[1] Uppsala Univ, Dept Evolut Biol, Evolut Biol Ctr, SE-75236 Uppsala, Sweden
关键词
D O I
10.1038/nrg1348
中图分类号
Q3 [遗传学];
学科分类号
071007 ; 090102 ;
摘要
Few genetic markers, if any, have found such widespread use as microsatellites, or simple/short tandem repeats. Features such as hypervariability and ubiquitous occurrence explain their usefulness, but these features also pose several questions. For example, why are microsatellites so abundant, why are they so polymorphic and by what mechanism do they mutate? Most importantly, what governs the intricate balance between the frequent genesis and expansion of simple repetitive arrays, and the fact that microsatellite repeats rarely reach appreciable lengths? In other words, how do microsatellites evolve?
引用
收藏
页码:435 / 445
页数:11
相关论文
共 134 条
[1]   Comparative analysis of amino acid repeats in rodents and humans [J].
Albà, MM ;
Guigó, R .
GENOME RESEARCH, 2004, 14 (04) :549-554
[2]   Microsatellites show mutational bias and heterozygote instability [J].
Amos, W ;
Sawcer, SJ ;
Feakes, RW ;
Rubinsztein, DC .
NATURE GENETICS, 1996, 13 (04) :390-391
[3]   Directional evolution of size coupled with ascertainment bias for variation in Drosophila microsatellites [J].
Amos, W ;
Hutter, CM ;
Schug, MD ;
Aquadro, CF .
MOLECULAR BIOLOGY AND EVOLUTION, 2003, 20 (04) :660-662
[4]   Complex evolution of a salmonid microsatellite locus and its consequences in inferring allelic divergence from size information [J].
Angers, B ;
Bernatchez, L .
MOLECULAR BIOLOGY AND EVOLUTION, 1997, 14 (03) :230-238
[5]   ALU REPEATS - A SOURCE FOR THE GENESIS OF PRIMATE MICROSATELLITES [J].
ARCOT, SS ;
WANG, ZY ;
WEBER, JL ;
DEININGER, PL ;
BATZER, MA .
GENOMICS, 1995, 29 (01) :136-144
[6]   Microsatellite variability differs between dinucleotide repeat motifs -: Evidence from Drosophila melanogaster [J].
Bachtrog, D ;
Agis, M ;
Imhof, M ;
Schlötterer, C .
MOLECULAR BIOLOGY AND EVOLUTION, 2000, 17 (09) :1277-1285
[7]   Distribution of dinucleotide microsatellites in the Drosophila melanogaster genome [J].
Bachtrog, D ;
Weiss, S ;
Zangerl, B ;
Brem, G ;
Schlötterer, C .
MOLECULAR BIOLOGY AND EVOLUTION, 1999, 16 (05) :602-610
[8]   Sequence interruptions confer differential stability at microsatellite alleles in mismatch repair-deficient cells [J].
Bacon, AL ;
Farrington, SM ;
Dunlop, MG .
HUMAN MOLECULAR GENETICS, 2000, 9 (18) :2707-2713
[9]   Microsatellite evolution at two hypervariable loci revealed by extensive avian pedigrees [J].
Beck, NR ;
Double, MC ;
Cockburn, A .
MOLECULAR BIOLOGY AND EVOLUTION, 2003, 20 (01) :54-61
[10]   The length distribution of perfect dimer repetitive DNA is consistent with its evolution by an unbiased single-step mutation process [J].
Bell, GI ;
Jurka, J .
JOURNAL OF MOLECULAR EVOLUTION, 1997, 44 (04) :414-421