共 134 条
Microsatellites: Simple sequences with complex evolution
被引:1616
作者:

Ellegren, H
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机构:
Uppsala Univ, Dept Evolut Biol, Evolut Biol Ctr, SE-75236 Uppsala, Sweden Uppsala Univ, Dept Evolut Biol, Evolut Biol Ctr, SE-75236 Uppsala, Sweden
机构:
[1] Uppsala Univ, Dept Evolut Biol, Evolut Biol Ctr, SE-75236 Uppsala, Sweden
关键词:
D O I:
10.1038/nrg1348
中图分类号:
Q3 [遗传学];
学科分类号:
071007 ;
090102 ;
摘要:
Few genetic markers, if any, have found such widespread use as microsatellites, or simple/short tandem repeats. Features such as hypervariability and ubiquitous occurrence explain their usefulness, but these features also pose several questions. For example, why are microsatellites so abundant, why are they so polymorphic and by what mechanism do they mutate? Most importantly, what governs the intricate balance between the frequent genesis and expansion of simple repetitive arrays, and the fact that microsatellite repeats rarely reach appreciable lengths? In other words, how do microsatellites evolve?
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页码:435 / 445
页数:11
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共 134 条
[1]
Comparative analysis of amino acid repeats in rodents and humans
[J].
Albà, MM
;
Guigó, R
.
GENOME RESEARCH,
2004, 14 (04)
:549-554

Albà, MM
论文数: 0 引用数: 0
h-index: 0
机构: Univ Pompeu Fabra, Inst Municipal Invest Med, Dept Ciencias Expt & Salut, Grp Recerca Informat Biomed, Barcelona 08003, Spain

Guigó, R
论文数: 0 引用数: 0
h-index: 0
机构: Univ Pompeu Fabra, Inst Municipal Invest Med, Dept Ciencias Expt & Salut, Grp Recerca Informat Biomed, Barcelona 08003, Spain
[2]
Microsatellites show mutational bias and heterozygote instability
[J].
Amos, W
;
Sawcer, SJ
;
Feakes, RW
;
Rubinsztein, DC
.
NATURE GENETICS,
1996, 13 (04)
:390-391

Amos, W
论文数: 0 引用数: 0
h-index: 0
机构: ADDENBROOKES NHS TRUST,E ANGLIAN REG GENET SERV,MOL GENET LAB,CAMBRIDGE CB2 2QQ,ENGLAND

Sawcer, SJ
论文数: 0 引用数: 0
h-index: 0
机构: ADDENBROOKES NHS TRUST,E ANGLIAN REG GENET SERV,MOL GENET LAB,CAMBRIDGE CB2 2QQ,ENGLAND

Feakes, RW
论文数: 0 引用数: 0
h-index: 0
机构: ADDENBROOKES NHS TRUST,E ANGLIAN REG GENET SERV,MOL GENET LAB,CAMBRIDGE CB2 2QQ,ENGLAND

Rubinsztein, DC
论文数: 0 引用数: 0
h-index: 0
机构: ADDENBROOKES NHS TRUST,E ANGLIAN REG GENET SERV,MOL GENET LAB,CAMBRIDGE CB2 2QQ,ENGLAND
[3]
Directional evolution of size coupled with ascertainment bias for variation in Drosophila microsatellites
[J].
Amos, W
;
Hutter, CM
;
Schug, MD
;
Aquadro, CF
.
MOLECULAR BIOLOGY AND EVOLUTION,
2003, 20 (04)
:660-662

Amos, W
论文数: 0 引用数: 0
h-index: 0
机构: Univ Cambridge, Dept Zool, Cambridge, England

Hutter, CM
论文数: 0 引用数: 0
h-index: 0
机构: Univ Cambridge, Dept Zool, Cambridge, England

Schug, MD
论文数: 0 引用数: 0
h-index: 0
机构: Univ Cambridge, Dept Zool, Cambridge, England

Aquadro, CF
论文数: 0 引用数: 0
h-index: 0
机构: Univ Cambridge, Dept Zool, Cambridge, England
[4]
Complex evolution of a salmonid microsatellite locus and its consequences in inferring allelic divergence from size information
[J].
Angers, B
;
Bernatchez, L
.
MOLECULAR BIOLOGY AND EVOLUTION,
1997, 14 (03)
:230-238

Angers, B
论文数: 0 引用数: 0
h-index: 0
机构: UNIV LAVAL,DEPT BIOL,GIROQ,ST FOY,PQ G1K 7P4,CANADA

Bernatchez, L
论文数: 0 引用数: 0
h-index: 0
机构: UNIV LAVAL,DEPT BIOL,GIROQ,ST FOY,PQ G1K 7P4,CANADA
[5]
ALU REPEATS - A SOURCE FOR THE GENESIS OF PRIMATE MICROSATELLITES
[J].
ARCOT, SS
;
WANG, ZY
;
WEBER, JL
;
DEININGER, PL
;
BATZER, MA
.
GENOMICS,
1995, 29 (01)
:136-144

ARCOT, SS
论文数: 0 引用数: 0
h-index: 0
机构: LAWRENCE LIVERMORE NATL LAB,CTR HUMAN GENOME,BIOL & BIOTECHNOL RES PROGRAM,LIVERMORE,CA 94551

WANG, ZY
论文数: 0 引用数: 0
h-index: 0
机构: LAWRENCE LIVERMORE NATL LAB,CTR HUMAN GENOME,BIOL & BIOTECHNOL RES PROGRAM,LIVERMORE,CA 94551

WEBER, JL
论文数: 0 引用数: 0
h-index: 0
机构: LAWRENCE LIVERMORE NATL LAB,CTR HUMAN GENOME,BIOL & BIOTECHNOL RES PROGRAM,LIVERMORE,CA 94551

DEININGER, PL
论文数: 0 引用数: 0
h-index: 0
机构: LAWRENCE LIVERMORE NATL LAB,CTR HUMAN GENOME,BIOL & BIOTECHNOL RES PROGRAM,LIVERMORE,CA 94551

BATZER, MA
论文数: 0 引用数: 0
h-index: 0
机构: LAWRENCE LIVERMORE NATL LAB,CTR HUMAN GENOME,BIOL & BIOTECHNOL RES PROGRAM,LIVERMORE,CA 94551
[6]
Microsatellite variability differs between dinucleotide repeat motifs -: Evidence from Drosophila melanogaster
[J].
Bachtrog, D
;
Agis, M
;
Imhof, M
;
Schlötterer, C
.
MOLECULAR BIOLOGY AND EVOLUTION,
2000, 17 (09)
:1277-1285

Bachtrog, D
论文数: 0 引用数: 0
h-index: 0
机构:
Inst Tierzucht & Genet, A-1210 Vienna, Austria Inst Tierzucht & Genet, A-1210 Vienna, Austria

Agis, M
论文数: 0 引用数: 0
h-index: 0
机构:
Inst Tierzucht & Genet, A-1210 Vienna, Austria Inst Tierzucht & Genet, A-1210 Vienna, Austria

Imhof, M
论文数: 0 引用数: 0
h-index: 0
机构:
Inst Tierzucht & Genet, A-1210 Vienna, Austria Inst Tierzucht & Genet, A-1210 Vienna, Austria

Schlötterer, C
论文数: 0 引用数: 0
h-index: 0
机构:
Inst Tierzucht & Genet, A-1210 Vienna, Austria Inst Tierzucht & Genet, A-1210 Vienna, Austria
[7]
Distribution of dinucleotide microsatellites in the Drosophila melanogaster genome
[J].
Bachtrog, D
;
Weiss, S
;
Zangerl, B
;
Brem, G
;
Schlötterer, C
.
MOLECULAR BIOLOGY AND EVOLUTION,
1999, 16 (05)
:602-610

Bachtrog, D
论文数: 0 引用数: 0
h-index: 0
机构:
Inst Tierzucht & Genet, A-1210 Vienna, Austria Inst Tierzucht & Genet, A-1210 Vienna, Austria

Weiss, S
论文数: 0 引用数: 0
h-index: 0
机构:
Inst Tierzucht & Genet, A-1210 Vienna, Austria Inst Tierzucht & Genet, A-1210 Vienna, Austria

Zangerl, B
论文数: 0 引用数: 0
h-index: 0
机构:
Inst Tierzucht & Genet, A-1210 Vienna, Austria Inst Tierzucht & Genet, A-1210 Vienna, Austria

Brem, G
论文数: 0 引用数: 0
h-index: 0
机构:
Inst Tierzucht & Genet, A-1210 Vienna, Austria Inst Tierzucht & Genet, A-1210 Vienna, Austria

Schlötterer, C
论文数: 0 引用数: 0
h-index: 0
机构:
Inst Tierzucht & Genet, A-1210 Vienna, Austria Inst Tierzucht & Genet, A-1210 Vienna, Austria
[8]
Sequence interruptions confer differential stability at microsatellite alleles in mismatch repair-deficient cells
[J].
Bacon, AL
;
Farrington, SM
;
Dunlop, MG
.
HUMAN MOLECULAR GENETICS,
2000, 9 (18)
:2707-2713

Bacon, AL
论文数: 0 引用数: 0
h-index: 0
机构: Univ Edinburgh, Dept Oncol, Edinburgh EH4 2XU, Midlothian, Scotland

Farrington, SM
论文数: 0 引用数: 0
h-index: 0
机构: Univ Edinburgh, Dept Oncol, Edinburgh EH4 2XU, Midlothian, Scotland

Dunlop, MG
论文数: 0 引用数: 0
h-index: 0
机构: Univ Edinburgh, Dept Oncol, Edinburgh EH4 2XU, Midlothian, Scotland
[9]
Microsatellite evolution at two hypervariable loci revealed by extensive avian pedigrees
[J].
Beck, NR
;
Double, MC
;
Cockburn, A
.
MOLECULAR BIOLOGY AND EVOLUTION,
2003, 20 (01)
:54-61

Beck, NR
论文数: 0 引用数: 0
h-index: 0
机构:
Australian Natl Univ, Sch Bot & Zool, Evolutionary Ecol Grp, Canberra, ACT, Australia Australian Natl Univ, Sch Bot & Zool, Evolutionary Ecol Grp, Canberra, ACT, Australia

Double, MC
论文数: 0 引用数: 0
h-index: 0
机构:
Australian Natl Univ, Sch Bot & Zool, Evolutionary Ecol Grp, Canberra, ACT, Australia Australian Natl Univ, Sch Bot & Zool, Evolutionary Ecol Grp, Canberra, ACT, Australia

Cockburn, A
论文数: 0 引用数: 0
h-index: 0
机构:
Australian Natl Univ, Sch Bot & Zool, Evolutionary Ecol Grp, Canberra, ACT, Australia Australian Natl Univ, Sch Bot & Zool, Evolutionary Ecol Grp, Canberra, ACT, Australia
[10]
The length distribution of perfect dimer repetitive DNA is consistent with its evolution by an unbiased single-step mutation process
[J].
Bell, GI
;
Jurka, J
.
JOURNAL OF MOLECULAR EVOLUTION,
1997, 44 (04)
:414-421

Bell, GI
论文数: 0 引用数: 0
h-index: 0
机构:
GENET INFORMAT RES INST, PALO ALTO, CA 94306 USA GENET INFORMAT RES INST, PALO ALTO, CA 94306 USA

Jurka, J
论文数: 0 引用数: 0
h-index: 0
机构:
GENET INFORMAT RES INST, PALO ALTO, CA 94306 USA GENET INFORMAT RES INST, PALO ALTO, CA 94306 USA