Streamlining bioactive molecular discovery through integration and automation

被引:30
作者
Chow, Shiao
Liver, Samuel
Nelson, Adam [1 ]
机构
[1] Univ Leeds, Sch Chem, Leeds, W Yorkshire, England
基金
英国工程与自然科学研究理事会;
关键词
FRONTAL AFFINITY-CHROMATOGRAPHY; ACTIVITY-DIRECTED SYNTHESIS; DRUG DISCOVERY; MEDICINAL CHEMISTS; CHEMICAL SPACE; INHIBITORS; DIVERSITY; REAGENTS; LIBRARY; MICROFLUIDICS;
D O I
10.1038/s41570-018-0025-7
中图分类号
O6 [化学];
学科分类号
0703 ;
摘要
The discovery of bioactive small molecules is generally driven via iterative design-make-purify-test cycles. Automation is routinely harnessed at individual stages of these cycles to increase the productivity of drug discovery. Here, we describe recent progress to automate and integrate two or more adjacent stages within discovery workflows. Examples of such technologies include microfluidics, liquid-handling robotics and affinity-selection mass spectrometry. The value of integrated technologies is illustrated in the context of specific case studies in which modulators of targets, such as protein kinases, nuclear hormone receptors and protein-protein interactions, were discovered. We note that to maximize impact on the productivity of discovery, each of the integrated stages would need to have both high and matched throughput. We also consider the longer-term goal of realizing the fully autonomous discovery of bioactive small molecules through the integration and automation of all stages of discovery.
引用
收藏
页码:174 / 183
页数:10
相关论文
共 55 条
[1]   Integrated Platform for Expedited Synthesis-Purification-Testing of Small Molecule Libraries [J].
Baranczak, Aleksandra ;
Tu, Noah P. ;
Marjanovic, Jasmina ;
Searle, Philip A. ;
Vasudevan, Anil ;
Djuric, Stevan. W. .
ACS MEDICINAL CHEMISTRY LETTERS, 2017, 8 (04) :461-465
[2]   Organic synthesis provides opportunities to transform drug discovery [J].
Blakemore, David C. ;
Castro, Luis ;
Churcher, Ian ;
Rees, David C. ;
Thomas, Andrew W. ;
Wilson, David M. ;
Wood, Anthony .
NATURE CHEMISTRY, 2018, 10 (04) :383-394
[3]   Analysis of Past and Present Synthetic Methodologies on Medicinal Chemistry: Where Have All the New Reactions Gone? [J].
Brow, Dean G. ;
Bostrom, Jonas .
JOURNAL OF MEDICINAL CHEMISTRY, 2016, 59 (10) :4443-4458
[4]   Automated liquid-liquid extraction workstation for library synthesis and its use in the parallel and chromatography-free synthesis of 2-Alkyl-3-alkyl-4-(3H)-quinazolinones [J].
Carpintero, Mercedes ;
Cifuentes, Marta ;
Ferritto, Rafael ;
Haro, Ruben ;
Toledo, Miguel A. .
JOURNAL OF COMBINATORIAL CHEMISTRY, 2007, 9 (05) :818-822
[5]  
Cernak T., 2001, J MED CHEM, V60, P15
[6]   Prediction of Organic Reaction Outcomes Using Machine Learning [J].
Coley, Connor W. ;
Barzilay, Regina ;
Jaakkola, Tommi S. ;
Green, William H. ;
Jensen, Klays F. .
ACS CENTRAL SCIENCE, 2017, 3 (05) :434-443
[7]  
Collins KD, 2013, NAT CHEM, V5, P597, DOI [10.1038/NCHEM.1669, 10.1038/nchem.1669]
[8]   Factors Determining the Selection of Organic Reactions by Medicinal Chemists and the Use of These Reactions in Arrays (Small Focused Libraries) [J].
Cooper, Tony W. J. ;
Campbell, Ian B. ;
Macdonald, Simon J. F. .
ANGEWANDTE CHEMIE-INTERNATIONAL EDITION, 2010, 49 (44) :8082-8091
[9]   Integrated Synthesis and Testing of Substituted Xanthine Based DPP4 Inhibitors: Application to Drug Discovery [J].
Czechtizky, Werngard ;
Dedio, Jueergen ;
Desai, Bimbisar ;
Dixon, Karen ;
Farrant, Elizabeth ;
Feng, Qixing ;
Morgan, Trevor ;
Parry, David M. ;
Ramjee, Manoj K. ;
Selway, Christopher N. ;
Schmidt, Thorsten ;
Tarver, Gary J. ;
Wright, Adrian G. .
ACS MEDICINAL CHEMISTRY LETTERS, 2013, 4 (08) :768-772
[10]   Rapid Discovery of a Novel Series of Abl Kinase Inhibitors by Application of an Integrated Microfluidic Synthesis and Screening Platform [J].
Desai, Bimbisar ;
Dixon, Karen ;
Farrant, Elizabeth ;
Feng, Qixing ;
Gibson, Karl R. ;
van Hoorn, Willem P. ;
Mills, James ;
Morgan, Trevor ;
Parry, David M. ;
Ramjee, Manoj K. ;
Selway, Christopher N. ;
Tarver, Gary J. ;
Whitlock, Gavin ;
Wrightt, Adrian G. .
JOURNAL OF MEDICINAL CHEMISTRY, 2013, 56 (07) :3033-3047