Smoothing techniques of global optimization: Distance scaling method in searches for most stable Lennard-Jones atomic clusters

被引:0
作者
Pillardy, J [1 ]
Piela, L [1 ]
机构
[1] UNIV WARSAW,DEPT CHEM,QUANTUM CHEM LAB,PL-02093 WARSAW,POLAND
关键词
potential energy smoothing; potential energy deformation; potential energy averaging; global optimization; stable structures; atomic clusters;
D O I
10.1002/(SICI)1096-987X(199712)18:16<2040::AID-JCC8>3.0.CO;2-L
中图分类号
O6 [化学];
学科分类号
0703 ;
摘要
Spatial averaging of the potential energy function facilitates the search for the most stable configuration of a molecular system Recently some global optimization methods of this kind. have been designed in the literature that rely on physical phenomena such as diffusion, wave function evolution in quantum mechanics, Smoluchowski dynamics, evolution in temperature of canonical ensembles, etc. In the present article we highlight the fact that all these methods, when applied to the Gaussian distributions of an ensemble, represent special cases of a set of differential equations involving the spatially averaged potential energy. Their structure suggests that the nature's strategy to cope with the global optimization is robust and differs only in the details in particular applications. The strategy consists of going downhill of the averaged potential energy, removing the barriers, and hunting for low energy regions by a selective increasing of the spatial averaging. In this study we explore the deformation of the potential rather than its averaging. The deformation comes from scaling of atomic distances and reduces the barriers even more effectively than the Gaussian averaging. The position and widths of the Gaussian distribution evolve similarly to the Gaussian density annealing (GDA), but we allow elliptical instead of spherical Gaussians as well as branching of the single trajectory of the system into multiple ones. When the temperature reaches 0 K, one has a number of independent Gaussian distributions, each corresponding to a structure and (usually low) energy of the system. The multiple elliptic-Gaussian distance scaling method has been applied to clusters of argon atoms (N = 5,...,31), a system serving usually as a benchmark domain. The method found the global minima for all but three clusters (of very low energy). The procedure is 20 or more times less expensive than the GDA one. (C) 1997 John Wiley & Sons, Inc.
引用
收藏
页码:2040 / 2049
页数:10
相关论文
共 20 条
[1]   GLOBAL ENERGY MINIMUM SEARCHES USING AN APPROXIMATE SOLUTION OF THE IMAGINARY TIME SCHRODINGER-EQUATION [J].
AMARA, P ;
HSU, D ;
STRAUB, JE .
JOURNAL OF PHYSICAL CHEMISTRY, 1993, 97 (25) :6715-6721
[2]   NEW SIMULATION METHODS FOR PROTEINS AND DNA [J].
ELBER, R .
CURRENT OPINION IN STRUCTURAL BIOLOGY, 1993, 3 (02) :260-264
[3]  
HOARE MR, 1979, ADV CHEM PHYS, P40
[4]   OPTIMIZATION BY SIMULATED ANNEALING [J].
KIRKPATRICK, S ;
GELATT, CD ;
VECCHI, MP .
SCIENCE, 1983, 220 (4598) :671-680
[5]   DIFFUSION EQUATION METHOD OF GLOBAL MINIMIZATION - PERFORMANCE FOR STANDARD TEST FUNCTIONS [J].
KOSTROWICKI, J ;
PIELA, L .
JOURNAL OF OPTIMIZATION THEORY AND APPLICATIONS, 1991, 69 (02) :269-284
[6]   PERFORMANCE OF THE DIFFUSION EQUATION METHOD IN SEARCHES FOR OPTIMUM STRUCTURES OF CLUSTERS OF LENNARD-JONES ATOMS [J].
KOSTROWICKI, J ;
PIELA, L ;
CHERAYIL, BJ ;
SCHERAGA, HA .
JOURNAL OF PHYSICAL CHEMISTRY, 1991, 95 (10) :4113-4119
[7]   APPROXIMATE SOLUTION OF THE CLASSICAL LIOUVILLE EQUATION USING GAUSSIAN PHASE PACKET DYNAMICS - APPLICATION TO ENHANCED EQUILIBRIUM AVERAGING AND GLOBAL OPTIMIZATION [J].
MA, JP ;
HSU, D ;
STRAUB, JE .
JOURNAL OF CHEMICAL PHYSICS, 1993, 99 (05) :4024-4035
[8]   SIMULATED ANNEALING USING THE CLASSICAL DENSITY DISTRIBUTION [J].
MA, JP ;
STRAUB, JE .
JOURNAL OF CHEMICAL PHYSICS, 1994, 101 (01) :533-541
[9]   THE MULTIPLE-MINIMA PROBLEM IN THE CONFORMATIONAL-ANALYSIS OF MOLECULES - DEFORMATION OF THE POTENTIAL-ENERGY HYPERSURFACE BY THE DIFFUSION EQUATION METHOD [J].
PIELA, L ;
KOSTROWICKI, J ;
SCHERAGA, HA .
JOURNAL OF PHYSICAL CHEMISTRY, 1989, 93 (08) :3339-3346
[10]  
PIELA L, 1994, J MOL STRUC-THEOCHEM, V308, P229