Diffusion MRI Signal Augmentation: From Single Shell to Multi Shell with Deep Learning

被引:26
作者
Koppers, Simon [1 ]
Haarburger, Christoph [1 ]
Merhof, Dorit [1 ]
机构
[1] Rhein Westfal TH Aachen, Inst Imaging & Comp Vis, Aachen, Germany
来源
COMPUTATIONAL DIFFUSION MRI | 2017年
关键词
TISSUE;
D O I
10.1007/978-3-319-54130-3_5
中图分类号
R445 [影像诊断学];
学科分类号
100207 ;
摘要
High Angular Resolution Diffusion Imaging makes it possible to capture information about the course and location of complex fiber structures in the human brain. Ideally, multi-shell sampling would be applied, which however increases the acquisition time. Therefore, multi-shell acquisitions are considered infeasible for practical use in a clinical setting. In this work, we present a data-driven approach that is able to augment single-shell signals to multi-shell signals based on Deep Neural Networks and Spherical Harmonics. The proposed concept is evaluated on synthetic data to investigate the impact of noise and number of gradients. Moreover, it is evaluated on human brain data from the Human Connectome Project, comprising 100 scans from different subjects. The proposed approach makes it possible to drastically reduce the signal acquisition time and performs equally well on both synthetic as well as real human brain data.
引用
收藏
页码:61 / 70
页数:10
相关论文
共 15 条
[1]  
Alexander DC, 2014, LECT NOTES COMPUT SC, V8675, P225, DOI 10.1007/978-3-319-10443-0_29
[2]  
[Anonymous], 2011, Advances in Neural Information Processing Systems 24: 25th Annual Conference on Neural Information Processing Systems 2011, NIPS 2011
[3]   MR DIFFUSION TENSOR SPECTROSCOPY AND IMAGING [J].
BASSER, PJ ;
MATTIELLO, J ;
LEBIHAN, D .
BIOPHYSICAL JOURNAL, 1994, 66 (01) :259-267
[4]  
Cybenko G., 1989, Mathematics of Control, Signals, and Systems, V2, P303, DOI 10.1007/BF02551274
[5]   Apparent diffusion coefficients from high angular resolution diffusion imaging: Estimation and applications [J].
Descoteaux, Maxime ;
Angelino, Elaine ;
Fitzgibbons, Shaun ;
Deriche, Rachid .
MAGNETIC RESONANCE IN MEDICINE, 2006, 56 (02) :395-410
[6]  
Duchi J, 2011, J MACH LEARN RES, V12, P2121
[7]   Dipy, a library for the analysis of diffusion MRI data [J].
Garyfallidis, Eleftherios ;
Brett, Matthew ;
Amirbekian, Bagrat ;
Rokem, Ariel ;
van der Walt, Stefan ;
Descoteaux, Maxime ;
Nimmo-Smith, Ian .
FRONTIERS IN NEUROINFORMATICS, 2014, 8
[8]  
Golkov V., 2015, Q SPACE DEEP LEARNIN, P37
[9]   APPROXIMATION CAPABILITIES OF MULTILAYER FEEDFORWARD NETWORKS [J].
HORNIK, K .
NEURAL NETWORKS, 1991, 4 (02) :251-257
[10]   Investigating the Prevalence of Complex Fiber Configurations in White Matter Tissue with Diffusion Magnetic Resonance Imaging [J].
Jeurissen, Ben ;
Leemans, Alexander ;
Tournier, Jacques-Donald ;
Jones, Derek K. ;
Sijbers, Jan .
HUMAN BRAIN MAPPING, 2013, 34 (11) :2747-2766