Formation versus Hydrolysis of the Peptide Bond from a Quantum-mechanical Viewpoint: The Role of Mineral Surfaces and Implications for the Origin of Life

被引:23
作者
Rimola, Albert [1 ,2 ]
Ugliengo, Piero [1 ,2 ]
Sodupe, Mariona [3 ]
机构
[1] Univ Turin, Dipartimento Chim IFM, NIS Ctr Excellence, I-10125 Turin, Italy
[2] Univ Turin, INSTM Mat Sci & Technol Natl Consortium, I-10125 Turin, Italy
[3] Univ Autonoma Barcelona, Dept Quim, Bellaterra 08193, Spain
关键词
Peptide bond formation; peptide hydrolysis; catalysis; mineral surfaces; theoretical calculations; prebiotic chemistry; AMINO-ACIDS; PREBIOTIC CHEMISTRY; POLYMERIZATION; MOBILITY; GLYCINE; CARBON; CO; MONTMORILLONITE; ATMOSPHERES; ADSORPTION;
D O I
10.3390/ijms10030746
中图分类号
Q5 [生物化学]; Q7 [分子生物学];
学科分类号
071010 ; 081704 ;
摘要
The condensation (polymerization by water elimination) of molecular building blocks to yield the first active biopolymers (e. g. of amino acids to form peptides) during primitive Earth is an intriguing question that nowadays still remains open since these processes are thermodynamically disfavoured in highly dilute water solutions. In the present contribution, formation and hydrolysis of glycine oligopeptides occurring on a cluster model of sanidine feldspar (001) surface have been simulated by quantum mechanical methods. Results indicate that the catalytic interplay between Lewis and Bronsted sites both present at the sanidine surface, in cooperation with the London forces acting between the biomolecules and the inorganic surface, plays a crucial role to: i) favour the condensation of glycine to yield oligopeptides as reaction products; ii) inhibit the hydrolysis of the newly formed oligopeptides. Both facts suggest that mineral surfaces may have helped in catalyzing, stabilizing and protecting from hydration the oligopeptides formed in the prebiotic era.
引用
收藏
页码:746 / 760
页数:15
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