An investigation of supramolecular synthons in 1,2,4-triazole-3(4H)-thione compounds. X-ray crystal structures, energetic and Hirshfeld surface analysis

被引:32
作者
Saeed, Aamer [1 ]
Ashraf, Zaman [2 ]
Nadeem, Humaira [3 ]
Simpson, Jim [4 ]
Perez, Hiram [5 ]
Erben, Mauricio F. [6 ]
机构
[1] Quaid I Azam Univ, Dept Chem, Islamabad 45320, Pakistan
[2] Allama Iqbal Univ, Dept Chem, Islamabad, Pakistan
[3] Riphah Int Univ, Dept Pharmaceut Chem, Riphah Inst Pharmaceut Sci, Islamabad, Pakistan
[4] Univ Otago, Dept Chem, POB 56, Dunedin 9054, New Zealand
[5] Univ Habana, Dept Quim Gen & Inorgan, Fac Quim, Havana 10400, Cuba
[6] Univ Nacl La Plata, Fac Ciencias Exactas, Dept Quim, CEQUINOR,CONICET,CCT La Plata, Bv 120 1465, RA-1900 La Plata, Buenos Aires, Argentina
关键词
Triazole; Crystal structure; Supramolecular synthons; Pixel energy; Hirshfeld surface analysis; INTERMOLECULAR INTERACTION ENERGIES; DIRECT NUMERICAL-INTEGRATION; CENTER-DOT-S; BIOLOGICAL-ACTIVITIES; ELECTRON-DENSITIES; DFT; DERIVATIVES; WEAK; 1,2,4-TRIAZOLE-3-THIONE; ANTIBACTERIAL;
D O I
10.1016/j.molstruc.2019.06.049
中图分类号
O64 [物理化学(理论化学)、化学物理学];
学科分类号
070304 ; 081704 ;
摘要
A series of four closely related 1,2,4-triazole-3-thione (1-4) compounds was obtained by heterocyclization of thiosemicarbazides under basic catalytic conditions. The crystal structures of the 4-alkyl-5-(substituted-phenyl)-2H-1,2,4-triazole-3(4H)-thione derivatives [4-alkyl = 4-ethyl-5-phenyl (1), 4-hexyl-5-phenyl (2), 4-hexyl-5-p-tolyl (3), and 4-ethyl-5-(2,4,6-trimethoxyphenyl) (4)] have been determined. PIXEL lattice energy calculations revealed that dispersion components make the major contributions, with the coulombic terms also contributing significantly to the total energy. Interaction energies for the inversion dimers involving N-H center dot center dot center dot S=C hydrogen bonds indicate a dominant contribution to packing stabilization coming from the coulombic energy component. Hirshfeld surfaces and 2D-fingerprint plots allowed us to visualize different intermolecular contacts and their relative contributions to the total surface in each compound. The comprehensive analysis of the crystal packing and the energetic features demonstrate the key role of the R-2(2)(8) supramolecular synthon of the type (center dot center dot center dot HNCS)(2) in the solid state structures of these 1,2,4-triazole-3-thiones. (C) 2019 Elsevier B.V. All rights reserved.
引用
收藏
页码:796 / 806
页数:11
相关论文
共 78 条
[1]   Electronic structure, hydrogen bonding and spectroscopic profile of a new 1,2,4-triazole-5(4H)-thione derivative: A combined experimental and theoretical (DFT) analysis [J].
Al-Tamimi, Abdul-Malek S. .
JOURNAL OF MOLECULAR STRUCTURE, 2016, 1120 :215-227
[2]   The Cambridge Structural Database: a quarter of a million crystal structures and rising [J].
Allen, FH .
ACTA CRYSTALLOGRAPHICA SECTION B-STRUCTURAL SCIENCE, 2002, 58 (3 PART 1) :380-388
[3]   3-(Adamantan-1-yl)-4-(prop-2-en-1-yl)1H-1,2,4-triazole-5(4H)-thione [J].
Almutairi, Maha S. ;
Al-Shehri, Mona M. ;
El-Emam, Ali A. ;
Ng, Weng ;
Tiekink, Edward R. T. .
ACTA CRYSTALLOGRAPHICA SECTION E-CRYSTALLOGRAPHIC COMMUNICATIONS, 2012, 68 :O656-U1771
[4]  
[Anonymous], 1999, TITAN2000
[5]   Triazoles and tetrazoles: Prime ligands to generate remarkable coordination materials [J].
Aromi, Guillem ;
Barrios, Leoni A. ;
Roubeau, Olivier ;
Gamez, Patrick .
COORDINATION CHEMISTRY REVIEWS, 2011, 255 (5-6) :485-546
[6]   PATTERNS IN HYDROGEN BONDING - FUNCTIONALITY AND GRAPH SET ANALYSIS IN CRYSTALS [J].
BERNSTEIN, J ;
DAVIS, RE ;
SHIMONI, L ;
CHANG, NL .
ANGEWANDTE CHEMIE-INTERNATIONAL EDITION, 1995, 34 (15) :1555-1573
[7]   The anti-cancer effects of itraconazole in epithelial ovarian cancer [J].
Choi, Chel Hun ;
Ryu, Ji-Yoon ;
Cho, Young-Jae ;
Jeon, Hye-Kyung ;
Choi, Jung-Joo ;
Ylaya, Kris ;
Lee, Yoo-Young ;
Kim, Tae-Joong ;
Chung, Joon-Yong ;
Hewitt, Stephen M. ;
Kim, Byoung-Gie ;
Bae, Duk-Soo ;
Lee, Jeong-Won .
SCIENTIFIC REPORTS, 2017, 7
[8]   Weak and strong hydrogen bonds conducting the supramolecular framework of 1-butyl-3-(1-naphthoyl)thiourea: crystal structure, vibrational studies, DFT methods, Pixel energies and Hirshfeld surface analysis [J].
Contreras Aguilar, E. ;
Echeverria, G. A. ;
Piro, O. E. ;
Ulic, S. E. ;
Jios, J. L. ;
Tuttolomondo, M. E. ;
Perez, H. .
MOLECULAR PHYSICS, 2018, 116 (03) :399-413
[9]   Synthesis and characterization of some 1,2,4-triazole-3-thiones obtained from intramolecular cyclization of new 1-(4-(4-X-phenylsulfonyl)benzoyl)-4-(4-iodophenyl)-3-thiosemicarbazides [J].
Cretu, Olga D. ;
Barbuceanu, Stefania F. ;
Saramet, Gabriel ;
Draghici, Constantin .
JOURNAL OF THE SERBIAN CHEMICAL SOCIETY, 2010, 75 (11) :1463-1471
[10]   4-Ethyl-5-(2-hydroxyphenyl)-2H-1,2,4-triazole-3(4H)-thione [J].
Dege, N ;
Özdemir, N ;
Çetin, A ;
Cansiz, A ;
Sekerci, M ;
Dinçer, M .
ACTA CRYSTALLOGRAPHICA SECTION E-CRYSTALLOGRAPHIC COMMUNICATIONS, 2005, 61 :O17-O19