Highlights of B/D-HPP and HPP Resource Pillar Workshops at 12th Annual HUPO World Congress of Proteomics

被引：12

作者：

Aebersold, Ruedi ^{[1
]}

Bader, Gary D. ^{[2
]}

Edwards, Aled M. ^{[2
]}

van Eyk, Jennifer ^{[3
]}

Kussman, Martin ^{[4
]}

Qin, Jun ^{[5
]}

Omenn, Gilbert S. ^{[6
]}

机构：

[1] Inst Mol Syst Biol, Seattle, WA USA

[2] Univ Toronto, Dept Mol Genet, Toronto, ON, Canada

[3] Johns Hopkins Univ, Johns Hopkins Bayview Prote Ctr, Baltimore, MD USA

[4] Nestle Inst Hlth Sci, Lausanne, Switzerland

[5] Baylor Coll Med, Dept Mol & Cellular Biol, Houston, TX 77030 USA

[6] Univ Michigan, Ctr Computat Med & Bioinformat, Ann Arbor, MI 48109 USA

来源：

PROTEOMICS | 2014年 / 14卷 / 09期

基金：

英国惠康基金;

关键词：

Bioinformatics; Biology and Disease-driven Human Proteome Project; Human Proteome Project; HUPO-2013 Yokohama Congress; Organ and biofluid proteomes; ProteomeAnalyzer; HUMAN EYE PROTEOME; PROJECT;

D O I：

10.1002/pmic.201400041

中图分类号：

Q5 [生物化学];

学科分类号：

071010 ; 081704 ;

摘要：

At the 12th Annual HUPO World Congress of Proteomics in Japan, the Human Proteome Project (HPP) presented 16 scientific workshop sessions. Here we summarize highlights of ten workshops from the Biology and Disease-driven HPP (B/D-HPP) teams and three from the HPP Resource Pillars. Highlights of the three Chromosome-centric HPP sessions appeared in the many articles of the 2014 C-HPP special issue of the Journal of Proteome Research .

引用

页码：975 / 988

页数：14

共 12 条

[1] The Biology/Disease-driven Human Proteome Project (B/D-HPP): Enabling Protein Research for the Life Sciences Community [J].

Aebersold, Ruedi ;

Bader, Gary D. ;

Edwards, Aled M. ;

van Eyk, Jennifer E. ;

Kussmann, Martin ;

Qin, Jun ;

Omenn, Gilbert S. .

JOURNAL OF PROTEOME RESEARCH, 2013, 12 (01) :23-27

[2] Personal Omics Profiling Reveals Dynamic Molecular and Medical Phenotypes [J].

Chen, Rui ;

Mias, George I. ;

Li-Pook-Than, Jennifer ;

Jiang, Lihua ;

Lam, Hugo Y. K. ;

Chen, Rong ;

Miriami, Elana ;

Karczewski, Konrad J. ;

Hariharan, Manoj ;

Dewey, Frederick E. ;

Cheng, Yong ;

Clark, Michael J. ;

Im, Hogune ;

Habegger, Lukas ;

Balasubramanian, Suganthi ;

O'Huallachain, Maeve ;

Dudley, Joel T. ;

Hillenmeyer, Sara ;

Haraksingh, Rajini ;

Sharon, Donald ;

Euskirchen, Ghia ;

Lacroute, Phil ;

Bettinger, Keith ;

Boyle, Alan P. ;

Kasowski, Maya ;

Grubert, Fabian ;

Seki, Scott ;

Garcia, Marco ;

Whirl-Carrillo, Michelle ;

Gallardo, Mercedes ;

Blasco, Maria A. ;

Greenberg, Peter L. ;

Snyder, Phyllis ;

Klein, Teri E. ;

Altman, Russ B. ;

Butte, Atul J. ;

Ashley, Euan A. ;

Gerstein, Mark ;

Nadeau, Kari C. ;

Tang, Hua ;

Snyder, Michael .

CELL, 2012, 148 (06) :1293-1307

[3] State of the Human Proteome in 2013 as Viewed through PeptideAtlas: Comparing the Kidney, Urine, and Plasma Proteomes for the Biology- and Disease-Driven Human Proteome Project [J].

Farrah, Terry ;

Deutsch, Eric W. ;

Omenn, Gilbert S. ;

Sun, Zhi ;

Watts, Julian D. ;

Yamamoto, Tadashi ;

Shteynberg, David ;

Harris, Micheleen M. ;

Moritz, Robert L. .

JOURNAL OF PROTEOME RESEARCH, 2014, 13 (01) :60-75

[4] New and improved proteomics technologies for understanding complex biological systems: Addressing a grand challenge in the life sciences [J].

Hood, Leroy E. ;

Omenn, Gilbert S. ;

Moritz, Robert L. ;

Aebersold, Ruedi ;

Yamamoto, Keith R. ;

Amos, Michael ;

Hunter-Cevera, Jennie ;

Locascio, Laurie .

PROTEOMICS, 2012, 12 (18) :2773-2783

[5] Metrics for the Human Proteome Project 2013-2014 and Strategies for Finding Missing Proteins [J].

Lane, Lydie ;

Bairoch, Amos ;

Beavis, Ronald C. ;

Deutsch, Eric W. ;

Gaudet, Pascale ;

Lundberg, Emma ;

Omenn, Gilbert S. .

JOURNAL OF PROTEOME RESEARCH, 2014, 13 (01) :15-20

[6] The Human Proteome Project: Current State and Future Direction [J].

Legrain, Pierre ;

Aebersold, Ruedi ;

Archakov, Alexander ;

Bairoch, Amos ;

Bala, Kumar ;

Beretta, Laura ;

Bergeron, John ;

Borchers, Christoph H. ;

Corthals, Garry L. ;

Costello, Catherine E. ;

Deutsch, Eric W. ;

Domon, Bruno ;

Hancock, William ;

He, Fuchu ;

Hochstrasser, Denis ;

Marko-Varga, Gyorgy ;

Salekdeh, Ghasem Hosseini ;

Sechi, Salvatore ;

Snyder, Michael ;

Srivastava, Sudhir ;

Uhlen, Mathias ;

Wu, Cathy H. ;

Yamamoto, Tadashi ;

Paik, Young-Ki ;

Omenn, Gilbert S. .

MOLECULAR & CELLULAR PROTEOMICS, 2011, 10 (07)

[7] Innovations in proteomic profiling of cancers: Alternative splice variants as a new class of cancer biomarker candidates and bridging of proteomics with structural biology [J].

Omenn, Gilbert S. ;

Menon, Rajasree ;

Zhang, Yang .

JOURNAL OF PROTEOMICS, 2013, 90 :28-37

[8] The human eye proteome project [J].

Omenn, Gilbert S. .

PROTEOMICS, 2013, 13 (16) :2375-2376

[9] Genome-wide Proteomics, Chromosome-centric Human Proteome Project (C-HPP), Part II [J].

Paik, Young-Ki ;

Omenn, Gilbert S. ;

Thongboonkerd, Visith ;

Marko-Varga, Gyorgy ;

Hancock, William S. .

JOURNAL OF PROTEOME RESEARCH, 2014, 13 (01) :1-4

[10] The Chromosome-Centric Human Proteome Project for cataloging proteins encoded in the genome [J].

Paik, Young-Ki ;

Jeong, Seul-Ki ;

Omenn, Gilbert S. ;

Uhlen, Mathias ;

Hanash, Samir ;

Cho, Sang Yun ;

Lee, Hyoung-Joo ;

Na, Keun ;

Choi, Eun-Young ;

Yan, Fangfei ;

Zhang, Fan ;

Zhang, Yue ;

Snyder, Michael ;

Cheng, Yong ;

Chen, Rui ;

Marko-Varga, Gyorgy ;

Deutsch, Eric W. ;

Kim, Hoguen ;

Kwon, Ja-Young ;

Aebersold, Ruedi ;

Bairoch, Amos ;

Taylor, Allen D. ;

Kim, Kwang Youl ;

Lee, Eun-Young ;

Hochstrasser, Denis ;

Legrain, Pierre ;

Hancock, William S. .

NATURE BIOTECHNOLOGY, 2012, 30 (03) :221-223

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