DNA overwinds when stretched

被引:323
作者
Gore, Jeff
Bryant, Zev
Noellmann, Marcelo
Le, Mai U.
Cozzarelli, Nicholas R.
Bustamante, Carlos [1 ]
机构
[1] Univ Calif Berkeley, Dept Phys, Berkeley, CA 94720 USA
[2] Univ Calif Berkeley, Dept Mol & Cell Biol, Berkeley, CA 94720 USA
[3] Univ Calif Berkeley, Howard Hughes Med Inst, Berkeley, CA 94720 USA
[4] Univ Calif Berkeley, Lawrence Berkeley Lab, Phys Biosci Div, Berkeley, CA 94720 USA
基金
美国国家卫生研究院;
关键词
D O I
10.1038/nature04974
中图分类号
O [数理科学和化学]; P [天文学、地球科学]; Q [生物科学]; N [自然科学总论];
学科分类号
07 ; 0710 ; 09 ;
摘要
DNA is often modelled as an isotropic rod(1-4), but its chiral structure suggests the possible importance of anisotropic mechanical properties, including coupling between twisting and stretching degrees of freedom. Simple physical intuition predicts that DNA should unwind under tension, as it is pulled towards a denatured structure(4-8). We used rotor bead tracking to directly measure twist - stretch coupling in single DNA molecules. Here we show that for small distortions, contrary to intuition, DNA overwinds under tension, reaching a maximum twist at a tension of similar to 30 pN. As tension is increased above this critical value, the DNA begins to unwind. The observed twist - stretch coupling predicts that DNA should also lengthen when overwound under constant tension, an effect that we quantitatively confirm. We present a simple model that explains these unusual mechanical properties, and also suggests a possible origin for the anomalously large torsional rigidity of DNA. Our results have implications for the action of DNA-binding proteins that must stretch and twist DNA to compensate for variability in the lengths of their binding sites(9-11). The requisite coupled DNA distortions are favoured by the intrinsic mechanical properties of the double helix reported here.
引用
收藏
页码:836 / 839
页数:4
相关论文
共 31 条
  • [1] [Anonymous], 2001, MECH MOTOR PROTEINS
  • [2] Ionic effects on the elasticity of single DNA molecules
    Baumann, CG
    Smith, SB
    Bloomfield, VA
    Bustamante, C
    [J]. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, 1997, 94 (12) : 6185 - 6190
  • [3] Structural transitions and elasticity from torque measurements on DNA
    Bryant, Z
    Stone, MD
    Gore, J
    Smith, SB
    Cozzarelli, NR
    Bustamante, C
    [J]. NATURE, 2003, 424 (6946) : 338 - 341
  • [4] Single-molecule studies of DNA mechanics
    Bustamante, C
    Smith, SB
    Liphardt, J
    Smith, D
    [J]. CURRENT OPINION IN STRUCTURAL BIOLOGY, 2000, 10 (03) : 279 - 285
  • [5] DNA: An extensible molecule
    Cluzel, P
    Lebrun, A
    Heller, C
    Lavery, R
    Viovy, JL
    Chatenay, D
    Caron, F
    [J]. SCIENCE, 1996, 271 (5250) : 792 - 794
  • [6] Single-molecule study of transcriptional pausing and arrest by E-coli RNA polymerase
    Davenport, RJ
    Wuite, GJL
    Landick, R
    Bustamante, C
    [J]. SCIENCE, 2000, 287 (5462) : 2497 - 2500
  • [7] CONFORMATIONAL FLUCTUATIONS OF DNA HELIX
    DEPEW, RE
    WANG, JC
    [J]. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, 1975, 72 (11) : 4275 - 4279
  • [8] Feynman R., 1970, FEYNMAN LECT PHYS
  • [9] Mechanochemical analysis of DNA gyrase using rotor bead tracking
    Gore, J
    Bryant, Z
    Stone, MD
    Nöllmann, MN
    Cozzarelli, NR
    Bustamante, C
    [J]. NATURE, 2006, 439 (7072) : 100 - 104
  • [10] Gore J, 2005, THESIS U CALIFORNIA