U2af1 is required for survival and function of hematopoietic stem/progenitor cells

被引:32
作者
Dutta, Avik [1 ]
Yang, Yue [1 ]
Le, Bao T. [1 ]
Zhang, Yifan [2 ,3 ]
Abdel-Wahab, Omar [4 ,5 ]
Zang, Chongzhi [1 ,2 ,3 ,6 ,7 ]
Mohi, Golam [1 ,7 ]
机构
[1] Univ Virginia, Dept Biochem & Mol Genet, Sch Med, Charlottesville, VA 22908 USA
[2] Univ Virginia, Ctr Publ Hlth Genom, Sch Med, Charlottesville, VA 22908 USA
[3] Univ Virginia, Dept Biomed Engn, Sch Med, Charlottesville, VA 22908 USA
[4] Mem Sloan Kettering Canc Ctr, Human Oncol & Pathogenesis Program, New York, NY 10065 USA
[5] Mem Sloan Kettering Canc Ctr, Dept Med, Leukemia Serv, New York, NY 10065 USA
[6] Univ Virginia, Dept Publ Hlth Sci, Sch Med, Charlottesville, VA 22908 USA
[7] Univ Virginia, Ctr Canc, Charlottesville, VA 22908 USA
关键词
STEM-CELLS; MUTATIONS; MYELODYSPLASIA; RECOGNITION; MACHINERY; PATHWAY; BINDING; E7107;
D O I
10.1038/s41375-020-01116-x
中图分类号
R73 [肿瘤学];
学科分类号
100214 ;
摘要
U2AF1 is involved in the recognition of the 3 ' splice site during pre-mRNA splicing. Mutations in U2AF1 are frequently observed in myelodysplastic syndromes. However, the role of wild-type U2AF1 in normal hematopoiesis has remained elusive. Using a novel conditional U2af1 knockout allele, we have found that deletion of U2af1 results in profound defects in hematopoiesis characterized by pancytopenia, ablation of hematopoietic stem/progenitor cells (HSPC) leading to bone marrow failure and early lethality in mice. U2af1 deletion impairs HSPC function and repopulation capacity. U2af1 deletion also causes increased DNA damage and reduced survival in hematopoietic progenitors. RNA sequencing analysis reveals significant alterations in the expression of genes related to HSC maintenance, cell proliferation, and DNA damage response-related pathways in U2af1-deficient HSPC. U2af1 deficiency also induces splicing alterations in genes important for HSPC function. This includes altered splicing and perturbed expression of Nfya and Pbx1 transcription factors in U2af1-deficient HSPC. Collectively, these results suggest an important role for U2af1 in the maintenance and function of HSPC in normal hematopoiesis. A better understanding of the normal function of U2AF1 in hematopoiesis is important for development of appropriate therapeutic approaches for U2AF1 mutant induced hematologic malignancies.
引用
收藏
页码:2382 / 2398
页数:17
相关论文
共 35 条
[1]   Homeodomain Transcription Factor Meis1 Is a Critical Regulator of Adult Bone Marrow Hematopoiesis [J].
Ariki, Reina ;
Morikawa, Satoru ;
Mabuchi, Yo ;
Suzuki, Sadafumi ;
Nakatake, Mayuka ;
Yoshioka, Kentaro ;
Hidano, Shinya ;
Nakauchi, Hiromitsu ;
Matsuzaki, Yumi ;
Nakamura, Takuro ;
Goitsuka, Ryo .
PLOS ONE, 2014, 9 (02)
[2]   A Pan-Cancer Analysis of Transcriptome Changes Associated with Somatic Mutations in U2AF1 Reveals Commonly Altered Splicing Events [J].
Brooks, Angela N. ;
Choi, Peter S. ;
de Waal, Luc ;
Sharifnia, Tanaz ;
Imielinski, Marcin ;
Saksena, Gordon ;
Pedamallu, Chandra Sekhar ;
Sivachenko, Andrey ;
Rosenberg, Mara ;
Chmielecki, Juliann ;
Lawrence, Michael S. ;
DeLuca, David S. ;
Getz, Gad ;
Meyerson, Matthew .
PLOS ONE, 2014, 9 (01)
[3]   NF-Y is necessary for hematopoietic stem cell proliferation and survival [J].
Bungartz, Gerd ;
Land, Hannah ;
Scadden, David T. ;
Emerson, Stephen G. .
BLOOD, 2012, 119 (06) :1380-1389
[4]   The Augmented R-Loop Is a Unifying Mechanism for Myelodysplastic Syndromes Induced by High-Risk Splicing Factor Mutations [J].
Chen, Liang ;
Chen, Jia-Yu ;
Huang, Yi-Jou ;
Gu, Ying ;
Qiu, Jinsong ;
Qian, Hao ;
Shao, Changwei ;
Zhang, Xuan ;
Hu, Jing ;
Li, Hairi ;
He, Shunmin ;
Zhou, Yu ;
Abdel-Wahab, Omar ;
Zhang, Dong-Er ;
Fu, Xiang-Dong .
MOLECULAR CELL, 2018, 69 (03) :412-+
[5]   Mutations affecting mRNAsplicing define distinct clinical phenotypes and correlate with patient outcome in myelodysplastic syndromes [J].
Damm, Frederik ;
Kosmider, Olivier ;
Gelsi-Boyer, Veronique ;
Renneville, Aline ;
Carbuccia, Nadine ;
Hidalgo-Curtis, Claire ;
Della Valle, Veronique ;
Couronne, Lucile ;
Scourzic, Laurianne ;
Chesnais, Virginie ;
Guerci-Bresler, Agnes ;
Slama, Bohrane ;
Beyne-Rauzy, Odile ;
Schmidt-Tanguy, Aline ;
Stamatoullas-Bastard, Aspasia ;
Dreyfus, Francois ;
Prebet, Thomas ;
de Botton, Stephane ;
Vey, Norbert ;
Morgan, Michael A. ;
Cross, Nicholas C. P. ;
Preudhomme, Claude ;
Birnbaum, Daniel ;
Bernard, Olivier A. ;
Fontenay, Michaela .
BLOOD, 2012, 119 (14) :3211-3218
[6]   Phase I Pharmacokinetic and Pharmacodynamic Study of the First-in-Class Spliceosome Inhibitor E7107 in Patients with Advanced Solid Tumors [J].
Eskens, Ferry A. L. M. ;
Ramos, Francisco J. ;
Burger, Herman ;
O'Brien, James P. ;
Piera, Adelaida ;
de Jonge, Maja J. A. ;
Mizui, Yoshiharu ;
Wiemer, Erik A. C. ;
Carreras, Maria Josepa ;
Baselga, Jose ;
Tabernero, Josep .
CLINICAL CANCER RESEARCH, 2013, 19 (22) :6296-6304
[7]   Impaired hematopoiesis and leukemia development in mice with a conditional knock-in allele of a mutant splicing factor gene U2af1 [J].
Fei, Dennis Liang ;
Zhen, Tao ;
Durham, Benjamin ;
Ferrarone, John ;
Zhang, Tuo ;
Garrett, Lisa ;
Yoshimi, Akihide ;
Abdel-Wahab, Omar ;
Bradley, Robert K. ;
Liu, Paul ;
Varmus, Harold .
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, 2018, 115 (44) :E10437-E10446
[8]   Pbx1 regulates self-renewal of long-term hematopoietic stem cells by maintaining their quiescence [J].
Ficara, Francesca ;
Murphy, Mark J. ;
Lin, Min ;
Cleary, Michael L. .
CELL STEM CELL, 2008, 2 (05) :484-496
[9]   The anti-tumor drug E7107 reveals an essential role for SF3b in remodeling U2 snRNP to expose the branch point-binding region [J].
Folco, Eric G. ;
Coil, Kaitlyn E. ;
Reed, Robin .
GENES & DEVELOPMENT, 2011, 25 (05) :440-444
[10]   Recurrent mutations in the U2AF1 splicing factor in myelodysplastic syndromes [J].
Graubert, Timothy A. ;
Shen, Dong ;
Ding, Li ;
Okeyo-Owuor, Theresa ;
Lunn, Cara L. ;
Shao, Jin ;
Krysiak, Kilannin ;
Harris, Christopher C. ;
Koboldt, Daniel C. ;
Larson, David E. ;
McLellan, Michael D. ;
Dooling, David J. ;
Abbott, Rachel M. ;
Fulton, Robert S. ;
Schmidt, Heather ;
Kalicki-Veizer, Joelle ;
O'Laughlin, Michelle ;
Grillot, Marcus ;
Baty, Jack ;
Heath, Sharon ;
Frater, John L. ;
Nasim, Talat ;
Link, Daniel C. ;
Tomasson, Michael H. ;
Westervelt, Peter ;
DiPersio, John F. ;
Mardis, Elaine R. ;
Ley, Timothy J. ;
Wilson, Richard K. ;
Walter, Matthew J. .
NATURE GENETICS, 2012, 44 (01) :53-U77