Single Volume Image Generator and Deep Learning-Based ASD Classification

被引:48
作者
Ahmed, Md Rishad [1 ]
Zhang, Yuan [1 ]
Liu, Yi [2 ]
Liao, Hongen [3 ]
机构
[1] Southwest Univ, Coll Elect & Informat Engn, Chongqing Key Lab Nonlinear Circuits & Intelligen, Chongqing 400715, Peoples R China
[2] Civil Aviat Gen Hosp, Dept Resp Med, Beijing 100123, Peoples R China
[3] Tsinghua Univ, Sch Med, Dept Biomed Engn, Beijing 100084, Peoples R China
基金
中国国家自然科学基金;
关键词
Brain modeling; Pipelines; Deep learning; Functional magnetic resonance imaging; Feature extraction; Generators; Biomedical data modeling; image generator; convolutional neural network (CNN); autism spectrum disorder (ASD); fMRI; ABIDE; AUTISM SPECTRUM DISORDER; CONNECTIVITY; NETWORK; CHILDREN;
D O I
10.1109/JBHI.2020.2998603
中图分类号
TP [自动化技术、计算机技术];
学科分类号
0812 ;
摘要
Autism spectrum disorder (ASD) is an intricate neuropsychiatric brain disorder characterized by social deficits and repetitive behaviors. Deep learning approaches have been applied in clinical or behavioral identification of ASD; most erstwhile models are inadequate in their capacity to exploit the data richness. On the other hand, classification techniques often solely rely on region-based summary and/or functional connectivity analysis of functional magnetic resonance imaging (fMRI). Besides, biomedical data modeling to analyze big data related to ASD is still perplexing due to its complexity and heterogeneity. Single volume image consideration has not been previously investigated in classification purposes. By deeming these challenges, in this work, firstly, we design an image generator to generate single volume brain images from the whole-brain image by considering the voxel time point of each subject separately. Then, to classify ASD and typical control participants, we evaluate four deep learning approaches with their corresponding ensemble classifiers comprising one amended Convolutional Neural Network (CNN). Finally, to check out the data variability, we apply the proposed CNN classifier with leave-one-site-out 5-fold cross-validation across the sites and validate our findings by comparing with literature reports. We showcase our approach on large-scale multi-site brain imaging dataset (ABIDE) by considering four preprocessing pipelines, which outperforms the state-of-the-art methods. Hence, it is robust and consistent.
引用
收藏
页码:3044 / 3054
页数:11
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