OmicBrowse: a Flash-based high-performance graphics interface for genomic resources

被引：1

作者：

Matsushima, Akihiro ^{[1
]}

Kobayashi, Norio ^{[1
]}

Mochizuki, Yoshiki ^{[1
]}

Ishii, Manabu ^{[1
]}

Kawaguchi, Shuji ^{[1
]}

Endo, Takaho A. ^{[1
]}

Umetsu, Ryo ^{[1
]}

Makita, Yuko ^{[1
]}

Toyoda, Tetsuro ^{[1
]}

机构：

[1] RIKEN, Inst Phys & Chem Res, Bioinformat & Syst Engn Div BASE, Kanagawa 2300045, Japan

来源：

NUCLEIC ACIDS RESEARCH | 2009年 / 37卷

关键词：

TILING ARRAY; DATABASE; ARABIDOPSIS; INFORMATION; BROWSER; BIOLOGY; TRANSCRIPTOME; ANNOTATION; PROJECT; GENE;

D O I：

10.1093/nar/gkp404

中图分类号：

Q5 [生物化学]; Q7 [分子生物学];

学科分类号：

071010 ; 081704 ;

摘要：

OmicBrowse is a genome browser designed as a scalable system for maintaining numerous genome annotation datasets. It is an open source tool capable of regulating multiple user data access to each dataset to allow multiple users to have their own integrative view of both their unpublished and published datasets, so that the maintenance costs related to supplying each collaborator exclusively with their own private data are significantly reduced. OmicBrowse supports DAS1 imports and exports of annotations to Internet site servers worldwide. We also provide a data-download named OmicDownload server that interactively selects datasets and filters the data on the selected datasets. Our OmicBrowse server has been freely available at http://omicspace.riken.jp/ since its launch in 2003. The OmicBrowse source code is downloadable from http://sourceforge.net/projects/omicbrowse/.

引用

页码：W57 / W62

页数：6

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