Stain Style Transfer Using Transitive Adversarial Networks

被引:8
作者
Cai, Shaojin [1 ,2 ]
Xue, Yuyang [3 ]
Gao, Qinquan [1 ,2 ,3 ]
Du, Min [1 ,2 ]
Chen, Gang [4 ]
Zhang, Hejun [4 ]
Tong, Tong [1 ,2 ,3 ]
机构
[1] Fuzhou Univ, Coll Phys & Informat Engn, Fuzhou, Peoples R China
[2] Fujian Key Lab Med Instrumentat & Pharmaceut Tech, Fuzhou, Peoples R China
[3] Imperial Vis Technol, Fuzhou, Peoples R China
[4] Fujian Med Univ, Affiliated Hosp, Dept Pathol, Fujian Prov Canc Hosp, Fuzhou, Peoples R China
来源
MACHINE LEARNING FOR MEDICAL IMAGE RECONSTRUCTION, MLMIR 2019 | 2019年 / 11905卷
基金
中国国家自然科学基金;
关键词
Pathological slides; Stain transfer; Color transfer; Generative adversarial networks; NORMALIZATION;
D O I
10.1007/978-3-030-33843-5_15
中图分类号
TP18 [人工智能理论];
学科分类号
081104 ; 0812 ; 0835 ; 1405 ;
摘要
Digitized pathological diagnosis has been in increasing demand recently. It is well known that color information is critical to the automatic and visual analysis of pathological slides. However, the color variations due to various factors not only have negative impact on pathologist's diagnosis, but also will reduce the robustness of the algorithms. The factors that cause the color differences are not only in the process of making the slices, but also in the process of digitization. Different strategies have been proposed to alleviate the color variations. Most of such techniques rely on collecting color statistics to perform color matching across images and highly dependent on a reference template slide. Since the pathological slides between hospitals are usually unpaired, these methods do not yield good matching results. In this work, we propose a novel network that we refer to as Transitive Adversarial Networks (TAN) to transfer the color information among slides from different hospitals or centers. It is not necessary for an expert to pick a representative reference slide in the proposed TAN method. We compare the proposed method with the state-of-the-art methods quantitatively and qualitatively. Compared with the state-of-the-art methods, our method yields an improvement of 0.87 dB in terms of PSNR, demonstrating the effectiveness of the proposed TAN method in stain style transfer.
引用
收藏
页码:163 / 172
页数:10
相关论文
共 22 条
  • [1] [Anonymous], 2009, Proceedings of the Optical Tissue Image analysis in Microscopy, Histopathology and Endoscopy (MICCAI Workshop)
  • [2] [Anonymous], 2018, ARXIV180401601
  • [3] EM-Based Segmentation-Driven Color Standardization of Digitized Histopathology
    Basavanhally, Ajay
    Madabhushi, Anant
    [J]. MEDICAL IMAGING 2013: DIGITAL PATHOLOGY, 2013, 8676
  • [4] Bautista Pinky A, 2014, J Pathol Inform, V5, P4, DOI 10.4103/2153-3539.126153
  • [5] Stain Specific Standardization of Whole-Slide Histopathological Images
    Bejnordi, Babak Ehteshami
    Litjens, Geert
    Timofeeva, Nadya
    Otte-Holler, Irene
    Homeyer, Andre
    Karssemeijer, Nico
    van der Laak, Jeroen A. W. M.
    [J]. IEEE TRANSACTIONS ON MEDICAL IMAGING, 2016, 35 (02) : 404 - 415
  • [6] Quantitative analysis of stain variability in histology slides and an algorithm for standardization
    Bejnordi, Babak Ehteshami
    Timofeeva, Nadya
    Otte-Hoeller, Irene
    Karssemeijer, Nico
    van der Laak, Jeroen A. W. M.
    [J]. MEDICAL IMAGING 2014: DIGITAL PATHOLOGY, 2014, 9041
  • [7] Adversarial Stain Transfer for Histopathology Image Analysis
    BenTaieb, Aicha
    Hamarneh, Ghassan
    [J]. IEEE TRANSACTIONS ON MEDICAL IMAGING, 2018, 37 (03) : 792 - 802
  • [8] Ciompi F, 2017, I S BIOMED IMAGING, P160, DOI 10.1109/ISBI.2017.7950492
  • [9] Fully Dense UNet for 2-D Sparse Photoacoustic Tomography Artifact Removal
    Guan, Steven
    Khan, Amir A.
    Sikdar, Siddhartha
    Chitnis, Parag V.
    [J]. IEEE JOURNAL OF BIOMEDICAL AND HEALTH INFORMATICS, 2020, 24 (02) : 568 - 576
  • [10] Densely Connected Convolutional Networks
    Huang, Gao
    Liu, Zhuang
    van der Maaten, Laurens
    Weinberger, Kilian Q.
    [J]. 30TH IEEE CONFERENCE ON COMPUTER VISION AND PATTERN RECOGNITION (CVPR 2017), 2017, : 2261 - 2269