An R package for simulating growth and organic wastage in aquaculture farms in response to environmental conditions and husbandry practices

被引:7
作者
Belden, Damiano [1 ]
Porporato, Erika Maria Diletta [2 ]
Pastres, Roberto [1 ,2 ]
Brigolin, Daniele [1 ,2 ]
机构
[1] Bluefarm Srl, Venezia Marghera, Italy
[2] Ca Foscari Univ Venice, Dept Environm Sci Informat & Stat, Venice, Italy
来源
PLOS ONE | 2018年 / 13卷 / 05期
关键词
CLIMATE-CHANGE; TAPES-PHILIPPINARUM; IMPACT; LAGOON;
D O I
10.1371/journal.pone.0195732
中图分类号
O [数理科学和化学]; P [天文学、地球科学]; Q [生物科学]; N [自然科学总论];
学科分类号
07 ; 0710 ; 09 ;
摘要
A new R software package, RAC, is presented. RAC allows to simulate the rearing cycle of 4 species, finfish and shellfish, highly important in terms of production in the Mediterranean Sea. The package works both at the scale of the individual and of the farmed population. Mathematical models included in RAC were all validated in previous works, and account for growth and metabolism, based on input data characterizing the forcing functions water temperature, and food quality/quantity. The package provides a demo dataset of forcings for each species, as well as a typical set of husbandry parameters for Mediterranean conditions. The present work illustrates RAC main features, and its current capabilities/limitations. Three test cases are presented as a proof of concept of RAC applicability, and to demonstrate its potential for integrating different open products nowadays provided by remote sensing and operational oceanography.
引用
收藏
页数:14
相关论文
共 24 条
  • [11] FAO World Bank., 2015, AQ ZON SIT SEL AR MA
  • [12] Ferreira J G., 2012, Global Conference on Aquaculture 2010. Proceedings of the Global Conference on Aquaculture 2010, Phuket, P643
  • [13] EURO-CORDEX: new high-resolution climate change projections for European impact research
    Jacob, Daniela
    Petersen, Juliane
    Eggert, Bastian
    Alias, Antoinette
    Christensen, Ole Bossing
    Bouwer, Laurens M.
    Braun, Alain
    Colette, Augustin
    Deque, Michel
    Georgievski, Goran
    Georgopoulou, Elena
    Gobiet, Andreas
    Menut, Laurent
    Nikulin, Grigory
    Haensler, Andreas
    Hempelmann, Nils
    Jones, Colin
    Keuler, Klaus
    Kovats, Sari
    Kroener, Nico
    Kotlarski, Sven
    Kriegsmann, Arne
    Martin, Eric
    van Meijgaard, Erik
    Moseley, Christopher
    Pfeifer, Susanne
    Preuschmann, Swantje
    Radermacher, Christine
    Radtke, Kai
    Rechid, Diana
    Rounsevell, Mark
    Samuelsson, Patrick
    Somot, Samuel
    Soussana, Jean-Francois
    Teichmann, Claas
    Valentini, Riccardo
    Vautard, Robert
    Weber, Bjorn
    Yiou, Pascal
    [J]. REGIONAL ENVIRONMENTAL CHANGE, 2014, 14 (02) : 563 - 578
  • [14] McDaid Kapetsky J., 2007, Geographic information systems, DOI [10.13140/RG.2.1.4046.9842, DOI 10.13140/RG.2.1.4046.9842]
  • [15] MIPAAF, 2014, PIAN STRAT ACQ IT 20
  • [16] The next generation of scenarios for climate change research and assessment
    Moss, Richard H.
    Edmonds, Jae A.
    Hibbard, Kathy A.
    Manning, Martin R.
    Rose, Steven K.
    van Vuuren, Detlef P.
    Carter, Timothy R.
    Emori, Seita
    Kainuma, Mikiko
    Kram, Tom
    Meehl, Gerald A.
    Mitchell, John F. B.
    Nakicenovic, Nebojsa
    Riahi, Keywan
    Smith, Steven J.
    Stouffer, Ronald J.
    Thomson, Allison M.
    Weyant, John P.
    Wilbanks, Thomas J.
    [J]. NATURE, 2010, 463 (7282) : 747 - 756
  • [17] Managing the rearing of Tapes philippinarum in the lagoon of Venice:: a decision support system
    Pastres, R
    Solidoro, C
    Cossarini, G
    Canu, DM
    Dejak, C
    [J]. ECOLOGICAL MODELLING, 2001, 138 (1-3) : 231 - 245
  • [18] Impact of mussel farming on sedimentary geochemical properties of a Northern Adriatic area influenced by freshwater inflows
    Rampazzo, F.
    Berto, D.
    Giani, M.
    Brigolin, D.
    Covelli, S.
    Cacciatore, E.
    Brusa, R. Boscolo
    Bellucci, L. G.
    Pastres, R.
    [J]. ESTUARINE COASTAL AND SHELF SCIENCE, 2013, 129 : 49 - 58
  • [19] Impact of climate change in Mediterranean aquaculture
    Rosa, Rui
    Marques, Antonio
    Nunes, Maria L.
    [J]. REVIEWS IN AQUACULTURE, 2012, 4 (03) : 163 - 177
  • [20] Some operational uses of satellite remote sensing and marine GIS for sustainable fisheries and aquaculture
    Saitoh, Sei-Ichi
    Mugo, Robinson
    Radiarta, I. Nyoman
    Asaga, Shinsuke
    Takahashi, Fumihiro
    Hirawake, Toru
    Ishikawa, Yoichi
    Awaji, Toshiyuki
    In, Teiji
    Shima, Shigeki
    [J]. ICES JOURNAL OF MARINE SCIENCE, 2011, 68 (04) : 687 - 695