Application of UPLC-QTOF-MS Based Untargeted Metabolomics in Identification of Metabolites Induced in Pathogen-Infected Rice
被引:19
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Oh, Mira
[1
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Park, SeonJu
[2
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Kim, Hun
论文数: 0引用数: 0
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Korea Res Inst Chem Technol, Ctr Ecofriendly New Mat, Daejeon 34114, South KoreaYonsei Univ, Coll Pharm, Yonsei Inst Pharmaceut Sci, Incheon 21983, South Korea
Kim, Hun
[3
]
Choi, Gyung Ja
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Korea Res Inst Chem Technol, Ctr Ecofriendly New Mat, Daejeon 34114, South KoreaYonsei Univ, Coll Pharm, Yonsei Inst Pharmaceut Sci, Incheon 21983, South Korea
Choi, Gyung Ja
[3
]
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Kim, Seung Hyun
[1
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[1] Yonsei Univ, Coll Pharm, Yonsei Inst Pharmaceut Sci, Incheon 21983, South Korea
[2] Korea Basic Sci Inst KBSI, Chuncheon Ctr, Chunchon 24341, South Korea
[3] Korea Res Inst Chem Technol, Ctr Ecofriendly New Mat, Daejeon 34114, South Korea
Metabolomics is a useful tool for comparing metabolite changes in plants. Because of its high sensitivity, metabolomics combined with high-resolution mass spectrometry (HR-MS) is the most widely accepted metabolomics tools. In this study, we compared the metabolites of pathogen-infected rice (Oryza sativa) with control rice using an untargeted metabolomics approach. We profiled the mass features of two rice groups using a liquid chromatography quadrupole time-of-flight mass spectrometry (QTOF-MS) system. Twelve of the most differentially induced metabolites in infected rice were selected through multivariate data analysis and identified through a mass spectral database search. The role of these compounds in metabolic pathways was finally investigated using pathway analysis. Our study showed that the most frequently induced secondary metabolites are prostanoids, a subclass of eicosanoids, which are associated with plant defense metabolism against pathogen infection. Herein, we propose a new untargeted metabolomics approach for understanding plant defense system at the metabolic level.
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Korea Res Inst Chem Technol, Screening Div, Yusong Gu, Taejon 305600, South KoreaKorea Res Inst Chem Technol, Screening Div, Yusong Gu, Taejon 305600, South Korea
Kim, JC
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Choi, GJ
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Korea Res Inst Chem Technol, Screening Div, Yusong Gu, Taejon 305600, South KoreaKorea Res Inst Chem Technol, Screening Div, Yusong Gu, Taejon 305600, South Korea
Choi, GJ
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Park, JH
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Korea Res Inst Chem Technol, Screening Div, Yusong Gu, Taejon 305600, South KoreaKorea Res Inst Chem Technol, Screening Div, Yusong Gu, Taejon 305600, South Korea
Park, JH
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Kim, HT
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Korea Res Inst Chem Technol, Screening Div, Yusong Gu, Taejon 305600, South KoreaKorea Res Inst Chem Technol, Screening Div, Yusong Gu, Taejon 305600, South Korea
Kim, HT
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Cho, KY
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Korea Res Inst Chem Technol, Screening Div, Yusong Gu, Taejon 305600, South KoreaKorea Res Inst Chem Technol, Screening Div, Yusong Gu, Taejon 305600, South Korea
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Kangwon Natl Univ, Coll Pharm, Chunchon 24341, South KoreaKangwon Natl Univ, Coll Pharm, Chunchon 24341, South Korea
Lee, Jiho
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da Silva, Ricardo R.
论文数: 0引用数: 0
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Univ Calif San Diego, Skaggs Sch Pharm & Pharmaceut Sci, Collaborat Mass Spectrometry Innovat Ctr, La Jolla, CA 92093 USA
Univ Sao Paulo, Sch Pharmaceut Sci Ribeirao Preto, Dept Phys & Chem, NPPNS, Ave Cafe S-N, BR-14040903 Ribeirao Preto, SP, BrazilKangwon Natl Univ, Coll Pharm, Chunchon 24341, South Korea
da Silva, Ricardo R.
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Jang, Hyeon Seok
论文数: 0引用数: 0
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Kangwon Natl Univ, Coll Pharm, Chunchon 24341, South KoreaKangwon Natl Univ, Coll Pharm, Chunchon 24341, South Korea
Jang, Hyeon Seok
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Kim, Hyun Woo
论文数: 0引用数: 0
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Seoul Natl Univ, Coll Pharm, Seoul 08826, South Korea
Seoul Natl Univ, Res Inst Pharmaceut Sci, Seoul 08826, South KoreaKangwon Natl Univ, Coll Pharm, Chunchon 24341, South Korea
Kim, Hyun Woo
;
Kwon, Yong Soo
论文数: 0引用数: 0
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Kangwon Natl Univ, Coll Pharm, Chunchon 24341, South KoreaKangwon Natl Univ, Coll Pharm, Chunchon 24341, South Korea
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Centro Interdipartimentale di Ricerca sulla Risonanza Magnetica Nucleare per l’Ambiente, Agro-alimentare e i Nuovi Materiali (CERMANU), Università di Napoli Federico II, Via Università 100, PorticiCentro Interdipartimentale di Ricerca sulla Risonanza Magnetica Nucleare per l’Ambiente, Agro-alimentare e i Nuovi Materiali (CERMANU), Università di Napoli Federico II, Via Università 100, Portici
Nebbioso A.
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De Martino A.
论文数: 0引用数: 0
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机构:
Dipartimento di Agraria, Università di Napoli Federico II, Via Università 100, PorticiCentro Interdipartimentale di Ricerca sulla Risonanza Magnetica Nucleare per l’Ambiente, Agro-alimentare e i Nuovi Materiali (CERMANU), Università di Napoli Federico II, Via Università 100, Portici
De Martino A.
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Eltlbany N.
论文数: 0引用数: 0
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机构:
Julius Kühn-Institut, Federal Research Centre for Cultivated Plants (JKI), BrunswickCentro Interdipartimentale di Ricerca sulla Risonanza Magnetica Nucleare per l’Ambiente, Agro-alimentare e i Nuovi Materiali (CERMANU), Università di Napoli Federico II, Via Università 100, Portici
Eltlbany N.
;
Smalla K.
论文数: 0引用数: 0
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机构:
Julius Kühn-Institut, Federal Research Centre for Cultivated Plants (JKI), BrunswickCentro Interdipartimentale di Ricerca sulla Risonanza Magnetica Nucleare per l’Ambiente, Agro-alimentare e i Nuovi Materiali (CERMANU), Università di Napoli Federico II, Via Università 100, Portici
Smalla K.
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Piccolo A.
论文数: 0引用数: 0
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机构:
Centro Interdipartimentale di Ricerca sulla Risonanza Magnetica Nucleare per l’Ambiente, Agro-alimentare e i Nuovi Materiali (CERMANU), Università di Napoli Federico II, Via Università 100, Portici
Dipartimento di Agraria, Università di Napoli Federico II, Via Università 100, PorticiCentro Interdipartimentale di Ricerca sulla Risonanza Magnetica Nucleare per l’Ambiente, Agro-alimentare e i Nuovi Materiali (CERMANU), Università di Napoli Federico II, Via Università 100, Portici
机构:
Korea Res Inst Chem Technol, Screening Div, Yusong Gu, Taejon 305600, South KoreaKorea Res Inst Chem Technol, Screening Div, Yusong Gu, Taejon 305600, South Korea
Kim, JC
;
Choi, GJ
论文数: 0引用数: 0
h-index: 0
机构:
Korea Res Inst Chem Technol, Screening Div, Yusong Gu, Taejon 305600, South KoreaKorea Res Inst Chem Technol, Screening Div, Yusong Gu, Taejon 305600, South Korea
Choi, GJ
;
Park, JH
论文数: 0引用数: 0
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机构:
Korea Res Inst Chem Technol, Screening Div, Yusong Gu, Taejon 305600, South KoreaKorea Res Inst Chem Technol, Screening Div, Yusong Gu, Taejon 305600, South Korea
Park, JH
;
Kim, HT
论文数: 0引用数: 0
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机构:
Korea Res Inst Chem Technol, Screening Div, Yusong Gu, Taejon 305600, South KoreaKorea Res Inst Chem Technol, Screening Div, Yusong Gu, Taejon 305600, South Korea
Kim, HT
;
Cho, KY
论文数: 0引用数: 0
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机构:
Korea Res Inst Chem Technol, Screening Div, Yusong Gu, Taejon 305600, South KoreaKorea Res Inst Chem Technol, Screening Div, Yusong Gu, Taejon 305600, South Korea
机构:
Kangwon Natl Univ, Coll Pharm, Chunchon 24341, South KoreaKangwon Natl Univ, Coll Pharm, Chunchon 24341, South Korea
Lee, Jiho
;
da Silva, Ricardo R.
论文数: 0引用数: 0
h-index: 0
机构:
Univ Calif San Diego, Skaggs Sch Pharm & Pharmaceut Sci, Collaborat Mass Spectrometry Innovat Ctr, La Jolla, CA 92093 USA
Univ Sao Paulo, Sch Pharmaceut Sci Ribeirao Preto, Dept Phys & Chem, NPPNS, Ave Cafe S-N, BR-14040903 Ribeirao Preto, SP, BrazilKangwon Natl Univ, Coll Pharm, Chunchon 24341, South Korea
da Silva, Ricardo R.
;
Jang, Hyeon Seok
论文数: 0引用数: 0
h-index: 0
机构:
Kangwon Natl Univ, Coll Pharm, Chunchon 24341, South KoreaKangwon Natl Univ, Coll Pharm, Chunchon 24341, South Korea
Jang, Hyeon Seok
;
Kim, Hyun Woo
论文数: 0引用数: 0
h-index: 0
机构:
Seoul Natl Univ, Coll Pharm, Seoul 08826, South Korea
Seoul Natl Univ, Res Inst Pharmaceut Sci, Seoul 08826, South KoreaKangwon Natl Univ, Coll Pharm, Chunchon 24341, South Korea
Kim, Hyun Woo
;
Kwon, Yong Soo
论文数: 0引用数: 0
h-index: 0
机构:
Kangwon Natl Univ, Coll Pharm, Chunchon 24341, South KoreaKangwon Natl Univ, Coll Pharm, Chunchon 24341, South Korea
机构:
Centro Interdipartimentale di Ricerca sulla Risonanza Magnetica Nucleare per l’Ambiente, Agro-alimentare e i Nuovi Materiali (CERMANU), Università di Napoli Federico II, Via Università 100, PorticiCentro Interdipartimentale di Ricerca sulla Risonanza Magnetica Nucleare per l’Ambiente, Agro-alimentare e i Nuovi Materiali (CERMANU), Università di Napoli Federico II, Via Università 100, Portici
Nebbioso A.
;
De Martino A.
论文数: 0引用数: 0
h-index: 0
机构:
Dipartimento di Agraria, Università di Napoli Federico II, Via Università 100, PorticiCentro Interdipartimentale di Ricerca sulla Risonanza Magnetica Nucleare per l’Ambiente, Agro-alimentare e i Nuovi Materiali (CERMANU), Università di Napoli Federico II, Via Università 100, Portici
De Martino A.
;
Eltlbany N.
论文数: 0引用数: 0
h-index: 0
机构:
Julius Kühn-Institut, Federal Research Centre for Cultivated Plants (JKI), BrunswickCentro Interdipartimentale di Ricerca sulla Risonanza Magnetica Nucleare per l’Ambiente, Agro-alimentare e i Nuovi Materiali (CERMANU), Università di Napoli Federico II, Via Università 100, Portici
Eltlbany N.
;
Smalla K.
论文数: 0引用数: 0
h-index: 0
机构:
Julius Kühn-Institut, Federal Research Centre for Cultivated Plants (JKI), BrunswickCentro Interdipartimentale di Ricerca sulla Risonanza Magnetica Nucleare per l’Ambiente, Agro-alimentare e i Nuovi Materiali (CERMANU), Università di Napoli Federico II, Via Università 100, Portici
Smalla K.
;
Piccolo A.
论文数: 0引用数: 0
h-index: 0
机构:
Centro Interdipartimentale di Ricerca sulla Risonanza Magnetica Nucleare per l’Ambiente, Agro-alimentare e i Nuovi Materiali (CERMANU), Università di Napoli Federico II, Via Università 100, Portici
Dipartimento di Agraria, Università di Napoli Federico II, Via Università 100, PorticiCentro Interdipartimentale di Ricerca sulla Risonanza Magnetica Nucleare per l’Ambiente, Agro-alimentare e i Nuovi Materiali (CERMANU), Università di Napoli Federico II, Via Università 100, Portici