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'LungGENS': a web-based tool for mapping single-cell gene expression in the developing lung
被引:102
作者:

Du, Yina
论文数: 0 引用数: 0
h-index: 0
机构:
Cincinnati Childrens Hosp Med Ctr, Dept Perinatal & Pulm Biol, Perinatal Inst, Cincinnati, OH 45229 USA
Cincinnati Childrens Hosp Med Ctr, Sect Neonatol, Cincinnati, OH 45229 USA Cincinnati Childrens Hosp Med Ctr, Dept Perinatal & Pulm Biol, Perinatal Inst, Cincinnati, OH 45229 USA

Guo, Minzhe
论文数: 0 引用数: 0
h-index: 0
机构:
Cincinnati Childrens Hosp Med Ctr, Dept Perinatal & Pulm Biol, Perinatal Inst, Cincinnati, OH 45229 USA
Cincinnati Childrens Hosp Med Ctr, Sect Neonatol, Cincinnati, OH 45229 USA
Univ Cincinnati, Dept Elect Engn & Comp Syst, Cincinnati, OH USA Cincinnati Childrens Hosp Med Ctr, Dept Perinatal & Pulm Biol, Perinatal Inst, Cincinnati, OH 45229 USA

Whitsett, Jeffrey A.
论文数: 0 引用数: 0
h-index: 0
机构:
Cincinnati Childrens Hosp Med Ctr, Dept Perinatal & Pulm Biol, Perinatal Inst, Cincinnati, OH 45229 USA
Cincinnati Childrens Hosp Med Ctr, Sect Neonatol, Cincinnati, OH 45229 USA Cincinnati Childrens Hosp Med Ctr, Dept Perinatal & Pulm Biol, Perinatal Inst, Cincinnati, OH 45229 USA

Xu, Yan
论文数: 0 引用数: 0
h-index: 0
机构:
Cincinnati Childrens Hosp Med Ctr, Dept Perinatal & Pulm Biol, Perinatal Inst, Cincinnati, OH 45229 USA
Cincinnati Childrens Hosp Med Ctr, Sect Neonatol, Cincinnati, OH 45229 USA
Cincinnati Childrens Hosp Med Ctr, Div Biomed Informat, Cincinnati, OH 45229 USA Cincinnati Childrens Hosp Med Ctr, Dept Perinatal & Pulm Biol, Perinatal Inst, Cincinnati, OH 45229 USA
机构:
[1] Cincinnati Childrens Hosp Med Ctr, Dept Perinatal & Pulm Biol, Perinatal Inst, Cincinnati, OH 45229 USA
[2] Cincinnati Childrens Hosp Med Ctr, Sect Neonatol, Cincinnati, OH 45229 USA
[3] Univ Cincinnati, Dept Elect Engn & Comp Syst, Cincinnati, OH USA
[4] Cincinnati Childrens Hosp Med Ctr, Div Biomed Informat, Cincinnati, OH 45229 USA
来源:
关键词:
MOUSE;
D O I:
10.1136/thoraxjnl-2015-207035
中图分类号:
R56 [呼吸系及胸部疾病];
学科分类号:
摘要:
We developed LungGENS (Lung Gene Expression iN Single-cell), a web-based bioinformatics resource for querying single-cell gene expression databases by entering a gene symbol or a list of genes or selecting a cell type of their interest. Gene query provides quantitative RNA expression of the gene of interest in each lung cell type. Cell type query returns associated selective gene signatures and genes encoding cell surface markers and transcription factors in interactive heatmap and tables. LungGENS will be broadly applicable in respiratory research, providing a cell-specific RNA expression resource at single-cell resolution. LungGENS is freely available for non-commercial use at https://research.cchmc.org/pbge/lunggens/default.html.
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页码:1092 / 1094
页数:3
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