Association of chromosome 8q variants with prostate cancer risk in Caucasian and Hispanic men

被引:37
作者
Beuten, Joke [1 ,2 ]
Gelfond, Jonathan A. L. [3 ]
Martinez-Fierro, Margarita L. [4 ]
Weldon, Korri S. [2 ]
Crandall, AnaLisa C. [2 ]
Rojas-Martinez, Augusto [4 ]
Thompson, Ian M. [5 ]
Leach, Robin J. [1 ,2 ,5 ]
机构
[1] Univ Texas Hlth Sci Ctr San Antonio, Dept Pediat, San Antonio, TX 78229 USA
[2] Univ Texas Hlth Sci Ctr San Antonio, Dept Cellular & Struct Biol, San Antonio, TX 78229 USA
[3] Univ Texas Hlth Sci Ctr San Antonio, Dept Epidemiol & Biostat, San Antonio, TX 78229 USA
[4] Univ Autonoma Nuevo Leon, Sch Med, Dept Biochem & Mol Med, Monterrey, Mexico
[5] Univ Texas Hlth Sci Ctr San Antonio, Dept Urol, San Antonio, TX 78229 USA
关键词
SMC5-SMC6; COMPLEX; GENE-EXPRESSION; COPY NUMBER; LOCUS; BETA-DEFENSIN-1; METAANALYSIS; METASTASIS; PROTEINS; REGIONS; NSE2;
D O I
10.1093/carcin/bgp148
中图分类号
R73 [肿瘤学];
学科分类号
100214 ;
摘要
Genotyping of a 615 kb region within 8q24 with 49 haplotype-tagged single-nucleotide polymorphisms (SNPs) in 2109 samples (797 cases and 1312 controls) of two ethnic/racial groups found SNPs that are significantly associated with the risk for prostate cancer (PCa). The highest significance in Caucasian men was found for rs6983267; the AA genotype reduced the risk for PCa [odds ratio (OR) = 0.48, 95% confidence interval (CI) = 0.35-0.65, P = 2.74 x 10(-6)]. This SNP also had a significant independent effect from other SNPs in the region in this group. In Hispanic men, rs7837328 and rs921146 showed independent effects (OR = 2.55, 95% CI = 1.51-4.31, P = 4.33 x 10(-4), OR = 2.09, 95% CI = 1.40-3.12, P = 3.13 x 10(-4), respectively). Significant synergist effects for increasing numbers of high-risk alleles were found in both ethnicities. Haplotype analysis revealed major haplotypes, containing the non-risk alleles, conferred protection against PCa. We found high linkage disequilibrium between significant SNPs within the region and SNPs within the CUB and Sushi Multiple Domains 1 gene (CSMD1), on the short arm of chromosome 8 in both ethnicities. These data suggest that multiple interacting SNPs within 8q24, as well as different regions on chromosome 8 far beyond this 8q24 candidate region, may confer increased risk of PCa. This is the first report to investigate the involvement of 8q24 variants in the susceptibility for PCa in Hispanic men.
引用
收藏
页码:1372 / 1379
页数:8
相关论文
共 44 条
[31]   Multiple independent genetic variants in the 8q24 region are associated with prostate cancer risk [J].
Salinas, Claudia A. ;
Kwon, Erika ;
Carlson, Christopher S. ;
Koopmeiners, Joseph S. ;
Feng, Ziding ;
Karyadi, Danielle M. ;
Ostrander, Elaine A. ;
Stanford, Janet L. .
CANCER EPIDEMIOLOGY BIOMARKERS & PREVENTION, 2008, 17 (05) :1203-1213
[32]  
Schug J, 1997, CBILTR19971001V00 U
[33]   Oct4A is Expressed by a Subpopulation of Prostate Neuroendocrine Cells [J].
Sotomayor, Paula ;
Godoy, Alejandro ;
Smith, Gary J. ;
Huss, Wendy J. .
PROSTATE, 2009, 69 (04) :401-410
[34]   Statistical significance for genomewide studies [J].
Storey, JD ;
Tibshirani, R .
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, 2003, 100 (16) :9440-9445
[35]   DNA copy number alterations in prostate cancers: A combined analysis of published CGH studies [J].
Sun, Jishan ;
Liu, Wennuan ;
Adams, Tamara S. ;
Sun, Jielin ;
Li, Xingnan ;
Turner, Aubrey R. ;
Chang, Baoli ;
Kim, Jin Woo ;
Zheng, Siqun Lilly ;
Isaacs, William B. ;
Xu, Jianfeng .
PROSTATE, 2007, 67 (07) :692-700
[36]   Transcript map of the 8p23 putative tumor suppressor region [J].
Sun, PC ;
Uppaluri, R ;
Schmidt, AP ;
Pashia, ME ;
Quant, EC ;
Sunwoo, JB ;
Gollin, SM ;
Scholnick, SB .
GENOMICS, 2001, 75 (1-3) :17-25
[37]   Oct4 pseudogenes are transcribed in cancers [J].
Suo, GL ;
Han, J ;
Wang, X ;
Zhang, JY ;
Zhao, YN ;
Zhao, YH ;
Dai, JW .
BIOCHEMICAL AND BIOPHYSICAL RESEARCH COMMUNICATIONS, 2005, 337 (04) :1047-1051
[38]   Confirmation of a positive association between prostate cancer risk and a locus at chromosome 8q24 [J].
Suuriniemi, Miia ;
Agalliu, Ilir ;
Schaid, Daniel J. ;
Johanneson, Bo ;
McDonnell, Shannon K. ;
Iwasaki, Lori ;
Stanford, Janet L. ;
Ostrander, Elaine A. .
CANCER EPIDEMIOLOGY BIOMARKERS & PREVENTION, 2007, 16 (04) :809-814
[39]   Common 8q24 sequence variations are associated with Asian Indian advanced prostate cancer risk [J].
Tan, Ying-Cai ;
Zeigler-Johnson, Charnita ;
Mittal, Rama D. ;
Mandhani, Anil ;
Mital, Balraj ;
Rebbeck, Timothy R. ;
Rennert, Hanna .
CANCER EPIDEMIOLOGY BIOMARKERS & PREVENTION, 2008, 17 (09) :2431-2435
[40]   Association of Genetic Polymorphisms at 8q24 With the Risk of Prostate Cancer in a Japanese Population [J].
Terada, Naoki ;
Tsuchiya, Norihiko ;
Ma, Zhiyong ;
Shimizu, Yosuke ;
Kobayashi, Takashi ;
Nakamura, Eijiro ;
Kamoto, Toshiyuki ;
Habuchi, Tomonori ;
Ogawa, Osamu .
PROSTATE, 2008, 68 (15) :1689-1695