PcrG protects the two long helical oligomerization domains of PcrV, by an interaction mediated by the intramolecular coiled-coil region of PcrG

被引:6
作者
Basu, Abhishek [1 ]
Das, Urmisha [1 ]
Dey, Supratim [1 ]
Datta, Saumen [1 ]
机构
[1] Indian Inst Chem Biol, Struct Biol & Bioinformat Div, Kolkata 700032, W Bengal, India
关键词
Regulation of TTSS; Functional translocon; Dynamic light scattering and elongated conformation; Homology model; Protease protected fragment; MS/MS sequence analysis; Reversal of oligomerization; Intramolecular coiled-coil; Deletion mutants; Surface plasmon resonance and protein-protein interaction; Molecular docking; PSEUDOMONAS-AERUGINOSA INFECTION; III SECRETION; YERSINIA-PESTIS; TRANSLOCATION PORE; PLASMA-MEMBRANE; V-ANTIGEN; PROTEINS; PREDICTION; LCRV; SEQUENCE;
D O I
10.1186/1472-6807-14-5
中图分类号
Q6 [生物物理学];
学科分类号
071011 ;
摘要
Background: PcrV is a hydrophilic translocator of type three secretion system (TTSS) and a structural component of the functional translocon. C-terminal helix of PcrV is essential for its oligomerization at the needle tip. Conformational changes within PcrV regulate the effector translocation. PcrG is a cytoplasmic regulator of TTSS and forms a high affinity complex with PcrV. C-terminal residues of PcrG control the effector secretion. Result: Both PcrV and PcrG-PcrV complex exhibit elongated conformation like their close homologs LcrV and LcrG-LcrV complex. The homology model of PcrV depicts a dumbbell shaped structure with N and C-terminal globular domains. The grip of the dumbbell is formed by two long helices (helix-7 and 12), which show high level of conservation both structurally and evolutionary. PcrG specifically protects a region of PcrV extending from helix-12 to helix-7, and encompassing the C-terminal globular domain. This fragment Delta PcrV((128-294)) interacts with PcrG with high affinity, comparable to the wild type interaction. Deletion of N-terminal globular domain leads to the oligomerization of PcrV, but PcrG restores the monomeric state of PcrV by forming a heterodimeric complex. The N-terminal globular domain (Delta PcrV((1-127))) does not interact with PcrG but maintains its monomeric state. Interaction affinities of various domains of PcrV with PcrG illustrates that helix-12 is the key mediator of PcrG-PcrV interaction, supported by helix-7. Bioinformatic analysis and study with our deletion mutant Delta PcrG((13-72)) revealed that the first predicted intramolecular coiled-coil domain of PcrG contains the PcrV interaction site. However, 12 N-terminal amino acids of PcrG play an indirect role in PcrG-PcrV interaction, as their deletion causes 40-fold reduction in binding affinity and changes the kinetic parameters of interaction. Delta PcrG((13-72)) fits within the groove formed between the two globular domains of PcrV, through hydrophobic interaction. Conclusion: PcrG interacts with PcrV through its intramolecular coiled-coil region and masks the domains responsible for oligomerization of PcrV at the needle tip. Also, PcrG could restore the monomeric state of oligomeric PcrV. Therefore, PcrG prevents the premature oligomerization of PcrV and maintains its functional state within the bacterial cytoplasm, which is a pre-requisite for formation of the functional translocon.
引用
收藏
页数:16
相关论文
共 38 条
  • [1] [Anonymous], PYMOL MOL GRAPHICS S
  • [2] ConSurf 2010: calculating evolutionary conservation in sequence and structure of proteins and nucleic acids
    Ashkenazy, Haim
    Erez, Elana
    Martz, Eric
    Pupko, Tal
    Ben-Tal, Nir
    [J]. NUCLEIC ACIDS RESEARCH, 2010, 38 : W529 - W533
  • [3] Function and molecular architecture of the Yersinia injectisome tip complex
    Broz, Petr
    Mueller, Catherine A.
    Mueller, Shirley A.
    Philippsen, Ansgar
    Sorg, Isabel
    Engel, Andreas
    Cornelis, Guy R.
    [J]. MOLECULAR MICROBIOLOGY, 2007, 65 (05) : 1311 - 1320
  • [4] Oligomerization of PcrV and LcrV, protective antigens of Pseudomonas aeruginosa and Yersinia pestis
    Caroline, Gebus
    Eric, Faudry
    Bohn, Yu-Sing Tammy
    Sylvie, Elsen
    Attree, Ina
    [J]. JOURNAL OF BIOLOGICAL CHEMISTRY, 2008, 283 (35) : 23940 - 23949
  • [5] The type III secretion injectisome
    Cornelis, Guy R.
    [J]. NATURE REVIEWS MICROBIOLOGY, 2006, 4 (11) : 811 - 825
  • [6] MULTIPLE SEQUENCE ALIGNMENT WITH HIERARCHICAL-CLUSTERING
    CORPET, F
    [J]. NUCLEIC ACIDS RESEARCH, 1988, 16 (22) : 10881 - 10890
  • [7] WebLogo: A sequence logo generator
    Crooks, GE
    Hon, G
    Chandonia, JM
    Brenner, SE
    [J]. GENOME RESEARCH, 2004, 14 (06) : 1188 - 1190
  • [8] The structure of Yersinia pestis V-antigen, an essential virulence factor and mediator of immunity against plague
    Derewenda, U
    Mateja, A
    Devedjiev, Y
    Routzahn, KM
    Evdokimov, AG
    Derewenda, ZS
    Waugh, DS
    [J]. STRUCTURE, 2004, 12 (02) : 301 - 306
  • [9] Conformational stability and differential structural analysis of LcrV, PcrV, BipD, and SipD from type III secretion systems
    Espina, Marianela
    Ausar, S. Fernando
    Middaugh, C. Russell
    Baxter, M. Aaron
    Picking, William D.
    Picking, Wendy L.
    [J]. PROTEIN SCIENCE, 2007, 16 (04) : 704 - 714
  • [10] Functional conservation of the effector protein translocators PopB/YopB and PopD/YopD of Pseudomonas aeruginosa and Yersinia pseudotuberculosis
    Frithz-Lindsten, E
    Holmström, A
    Jacobsson, L
    Soltani, M
    Olsson, J
    Rosqvist, R
    Forsberg, A
    [J]. MOLECULAR MICROBIOLOGY, 1998, 29 (05) : 1155 - 1165