Conformational Homogeneity in the Pr Isomer of Phytochrome Cph l

被引:17
作者
Bizimana, Laurie A. [1 ]
Epstein, Jordan [1 ]
Brazard, Johanna [1 ]
Turner, Daniel B. [1 ]
机构
[1] New York Univ, Dept Chem, 100 Washington Sq East, New York, NY 10003 USA
基金
美国国家科学基金会;
关键词
EXCITED-STATE ISOMERIZATION; FR PHOTOTRANSFORMATION; CONICAL INTERSECTION; FLUORESCENT PROTEIN; ULTRAFAST DYNAMICS; SOLVATION DYNAMICS; FEMTOSECOND; CHROMOPHORE; CYANOBACTERIAL; PHOTOISOMERIZATION;
D O I
10.1021/acs.jpcb.7b02180
中图分类号
O64 [物理化学(理论化学)、化学物理学];
学科分类号
070304 ; 081704 ;
摘要
Numerous time-resolved studies of the P-r to P-fr photoisomerization in phytochrome Cphl have revealed multiphasic excited-state decay kinetics. It remains unclear whether these kinetics arise from multiple ground-state conformational subpopulations or from a single ground-state conformation that undergoes an excited-state photoisomerization process either branching on the excited state or relaxing through multiple sequential intermediates. Many studies have attempted to resolve this debate by fitting the measured dynamics to proposed kinetic models, arriving at different conclusions. Here we probe spectral signatures of ground-state heterogeneity of Pr. Two-dimensional electronic spectra display negligible inhomogeneous line broadening, and vibrational coherence spectra extracted from transient absorption measurements do not contain nodes and phase shifts at the fluorescence maximum. These spectroscopic results support the homogeneous model, in which the primary photochemical transformation of P-r to Lumi-R occurs adiabatically on the excited P-state potential energy surface.
引用
收藏
页码:2622 / 2630
页数:9
相关论文
共 80 条
[1]  
[Anonymous], 1990, Principles of Nuclear Magnetic Resonance in One and Two Dimensions
[2]   Spectroscopic Studies of Cryptophyte Light Harvesting Proteins: Vibrations and Coherent Oscillations [J].
Arpin, Paul C. ;
Turner, Daniel B. ;
McClure, Scott D. ;
Jumper, Chanelle C. ;
Mirkovic, Tihana ;
Challa, J. Reddy ;
Lee, Joohyun ;
Teng, Chang Ying ;
Green, Beverley R. ;
Wilk, Krystyna E. ;
Curmi, Paul M. G. ;
Hoef-Emden, Kerstin ;
McCamant, David W. ;
Scholes, Gregory D. .
JOURNAL OF PHYSICAL CHEMISTRY B, 2015, 119 (31) :10025-10034
[3]   Structure-guided Engineering Enhances a Phytochrome-based Infrared Fluorescent Protein [J].
Auldridge, Michele E. ;
Satyshur, Kenneth A. ;
Anstrom, David M. ;
Forest, Katrina T. .
JOURNAL OF BIOLOGICAL CHEMISTRY, 2012, 287 (10) :7000-7009
[4]   First steps in the phytochrome phototransformation:: A comparative femtosecond study on the forward (Pr → Pfr) and back reaction (Pfr → Pr) [J].
Bischoff, M ;
Hermann, G ;
Rentsch, S ;
Strehlow, D .
BIOCHEMISTRY, 2001, 40 (01) :181-186
[5]   Vibrationally Coherent Preparation of the Transition State for Photoisomerization of the Cyanine Dye Cy5 in Water [J].
Bishop, Michael M. ;
Roscioli, Jerome D. ;
Ghosh, Soumen ;
Mueller, Jenny Jo ;
Shepherd, Nolan C. ;
Beck, Warren F. .
JOURNAL OF PHYSICAL CHEMISTRY B, 2015, 119 (23) :6905-6915
[6]   Resolving molecular vibronic structure using high-sensitivity two-dimensional electronic spectroscopy [J].
Bizimana, Laurie A. ;
Brazard, Johanna ;
Carbery, William P. ;
Gellen, Tobias ;
Turner, Daniel B. .
JOURNAL OF CHEMICAL PHYSICS, 2015, 143 (16)
[7]   Experimental Detection of Branching at a Conical Intersection in a Highly Fluorescent Molecule [J].
Brazard, Johanna ;
Bizimana, Laurie A. ;
Gellen, Tobias ;
Carbery, William P. ;
Turner, Daniel B. .
JOURNAL OF PHYSICAL CHEMISTRY LETTERS, 2016, 7 (01) :14-19
[8]   Accurate convergence of transient-absorption spectra using pulsed lasers [J].
Brazard, Johanna ;
Bizimana, Laurie A. ;
Turner, Daniel B. .
REVIEW OF SCIENTIFIC INSTRUMENTS, 2015, 86 (05)
[9]   Phase-stabilized two-dimensional electronic spectroscopy [J].
Brixner, T ;
Mancal, T ;
Stiopkin, IV ;
Fleming, GR .
JOURNAL OF CHEMICAL PHYSICS, 2004, 121 (09) :4221-4236
[10]   Molecular vibrations-induced quantum beats in two-dimensional electronic spectroscopy [J].
Butkus, Vytautas ;
Valkunas, Leonas ;
Abramavicius, Darius .
JOURNAL OF CHEMICAL PHYSICS, 2012, 137 (04) :8231