Mechanism equivalence in enzyme-substrate reactions: Distributed differential delay in enzyme kinetics

被引:23
作者
Hinch, R
Schnell, S
机构
[1] Math Inst, Ctr Math Biol, Oxford OX1 3LB, England
[2] Univ Oxford, Physiol Lab, Oxford OX1 3PT, England
[3] Univ Oxford Christ Church, Oxford OX1 1DP, England
基金
英国惠康基金;
关键词
enzyme kinetics; reaction intermediates; distributed differential delay; distinguishable; equivalent mechanisms;
D O I
10.1023/B:JOMC.0000033258.42803.60
中图分类号
O6 [化学];
学科分类号
0703 ;
摘要
We consider single enzyme-substrate reaction mechanisms involving multiple complexes and demonstrate that these are equivalent to a distributed delay system without complexes. The distribution of the delay is determined by the number of intermediates and the relative sizes of the rates of the individual reaction mechanisms. We also consider the limit where there are a large number of intermediate complexes, and the conditions under which a number of known reaction mechanisms are equivalent. The present formalism brings forth new perspectives in the implementation of experimental techniques to rule out particular reaction mechanisms by studying the distribution of the delay between reactant mixing and product formation.
引用
收藏
页码:253 / 264
页数:12
相关论文
共 30 条
[1]  
ALLWRIGHT DJ, COMMUNICATION
[2]  
Boyde TRC, 1980, FDN STONES BIOCH
[3]   Enzyme action. [J].
Brown, AJ .
JOURNAL OF THE CHEMICAL SOCIETY, 1902, 81 :373-388
[4]  
Brown AJ, 1892, J CHEM SOC, V61, P369
[5]   TOWARD A SYSTEMATIC DETERMINATION OF COMPLEX-REACTION MECHANISMS [J].
CHEVALIER, T ;
SCHREIBER, I ;
ROSS, J .
JOURNAL OF PHYSICAL CHEMISTRY, 1993, 97 (26) :6776-6787
[6]   THE EFFECTS OF A NONLINEAR DELAYED FEEDBACK ON A CHEMICAL-REACTION [J].
CHEVALIER, T ;
FREUND, A ;
ROSS, J .
JOURNAL OF CHEMICAL PHYSICS, 1991, 95 (01) :308-316
[7]   DISCRETE DELAY, DISTRIBUTED DELAY AND STABILITY SWITCHES [J].
COOKE, KL ;
GROSSMAN, Z .
JOURNAL OF MATHEMATICAL ANALYSIS AND APPLICATIONS, 1982, 86 (02) :592-627
[8]  
Cornish-Bowden A., 1995, FUNDAMENTALS ENZYME, V2
[9]   DIFFERENTIAL DELAY EQUATIONS IN CHEMICAL-KINETICS - NONLINEAR MODELS - THE CROSS-SHAPED PHASE-DIAGRAM AND THE OREGONATOR [J].
EPSTEIN, IR ;
LUO, Y .
JOURNAL OF CHEMICAL PHYSICS, 1991, 95 (01) :244-254
[10]   DELAY EFFECTS AND DIFFERENTIAL DELAY EQUATIONS IN CHEMICAL-KINETICS [J].
EPSTEIN, IR .
INTERNATIONAL REVIEWS IN PHYSICAL CHEMISTRY, 1992, 11 (01) :135-160