The complete chloroplast genome sequence of Cunninghamia lanceolata

被引：2
|
作者：
Zhu, Wenjuan [1 ,2 ]
Liu, Taiyi [1 ,2 ]
Liu, Chunxin [1 ,2 ]
Zhou, Feng [3 ]
Lai, Xu En [4 ]
Hu, Dehuo [5 ]
Chen, Jiehu [6 ]
Huang, Shaowei [1 ,2 ]
机构：
[1] South China Agr Univ, Guangdong Key Lab Innovat Dev & Utilizat Forest P, Guangzhou, Guangdong, Peoples R China
[2] South China Agr Univ, Coll Forestry & Landscape Architecture, Guangzhou, Guangdong, Peoples R China
[3] Coll Life Sci, Guangzhou, Guangdong, Peoples R China
[4] Longshan Forestry Farm, Lechang, Peoples R China
[5] Guangzhou Acad Forestry, Guangzhou, Guangdong, Peoples R China
[6] Sci Corp Gene, Guangzhou, Guangdong, Peoples R China
来源：
MITOCHONDRIAL DNA PART A | 2017年 / 28卷 / 03期
关键词：
Chloroplast genome; Cunninghamia lanceolata; phylogenetic analysis; Taxodiaceae; GENE ORGANIZATION; DNA;
D O I：
10.3109/19401736.2015.1127366
中图分类号：
Q3 [遗传学];
学科分类号：
071007 ; 090102 ;
摘要：
We determined the complete chloroplast genome sequence of Cunninghamia lanceolata (GenBank accession: NC_021437.1) in this study. The total length of the chloroplast genome is 135 334 bp. The GC content is 35%. A total of 119 genes are successfully annotated, including 35 tRNA (20 tRNA species), 3 rRNA (3 rRNA species) and 81 protein-coding genes (81 PCG species). Twelve protein-coding genes (rps16, ycf3, rpoC1, atpF, rps12, ndhB, rpl2, rpl16, petD, petB, ndhA, rps15) contain one or two introns. A maximum likelihood phylogenetic analysis showed that this newly characterized Cunninghamia lanceolata chloroplast genome will provide essential data for further study on phylogenetic resolution, biodiversity for the genus Cunninghamia and Taxodiacea.
引用
收藏
页码：405 / 406
页数：2
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