The K2(9-ethylguanine)122+ quadruplex is more stable to unimolecular dissociation than the K(9-ethylguanine)8+ quadruplex in the gas phase: a BIRD, energy resolved SORI-CID, IRMPD spectroscopic, and computational study

被引:4
作者
Azargun, Mohammad [1 ]
Meister, Paul J. [2 ]
Gauld, James W. [2 ]
Fridgen, Travis D. [1 ]
机构
[1] Mem Univ Newfoundland, Dept Chem, St John, NF, Canada
[2] Univ Windsor, Dept Chem & Biochem, Windsor, ON, Canada
基金
加拿大创新基金会; 加拿大自然科学与工程研究理事会;
关键词
TELOMERIC G-QUADRUPLEX; ALKALI-METAL CATIONS; NONCOVALENT INTERACTIONS; DNA STRUCTURES; DENSITY FUNCTIONALS; GUANINE QUARTET; PROMOTER REGION; CONTAINING RNA; NA+; KINETICS;
D O I
10.1039/c9cp01651a
中图分类号
O64 [物理化学(理论化学)、化学物理学];
学科分类号
070304 ; 081704 ;
摘要
A combination of experimental trapped-ion mass spectrometric studies and computational chemistry has been used in the present work to assess the intrinsic properties of the potassiated 9-ethylguanine (9eG) self-assembled quadruplex, K-2(9eG)(12)(2+), in the gas phase. Infrared multiple photon dissociation (IRMPD) spectroscopy in the N-H/C-H stretching region (2700-3800 cm(-1)) revealed that this G-quadruplex is a sandwich-type structure with two G-tetrads sandwiching each of the two K+, very similar to the structure determined previously for the K(9eG)(8)(+) complexes. The stability of K-2(9eG)(12)(2+) toward unimolecular dissociation and its binding energy were examined using energy-resolved sustained off-resonance collision induced dissociation (SORI-CID) and blackbody infrared radiative dissociation (BIRD) kinetics experiments. SORI-CID experiments showed that the self-assembled K-2(9eG)(12)(2+) complex undergoes charge separation forming K(9eG)(8)(+) and K(9eG)(4)(+) compared to K(9eG)(8)(+) which loses neutral 9eG. More interestingly, K-2(9eG)(12)(2+) is more stable toward unimolecular dissociation activated by SORI-CID than the K(9eG)(8)(+) complex. Temperature dependent BIRD kinetics for K-2(9eG)(12)(2+) were consistent with energy-resolved SORI-CID results showing K-2(9eG)(12)(2+) to have an activation energy of 225 +/- 15 kJ mol(-1), approximately 50 kJ mol(-1) greater than that determined for K(9eG)(8)(+). The extra stability of K-2(9eG)(12)(2+) is apparently not thermodynamic stability, but most likely due to an energy barrier for dissociation.
引用
收藏
页码:15319 / 15326
页数:8
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