ProDom and ProDom-CG: tools for protein domain analysis and whole genome comparisons

被引：263
作者：
Corpet, F
Servant, F
Gouzy, J
Kahn, D
机构：
[1] INRA, CNRS, Lab Genet Cellulaire, F-31326 Castanet Tolosan, France
[2] INRA, CNRS, Lab Biol Mol Relat Plantes Microorganismes, F-31326 Castanet Tolosan, France
来源：
NUCLEIC ACIDS RESEARCH | 2000年 / 28卷 / 01期
关键词：
D O I：
10.1093/nar/28.1.267
中图分类号：
Q5 [生物化学]; Q7 [分子生物学];
学科分类号：
071010 ; 081704 ;
摘要：
ProDom contains all protein domain families automatically generated from the SWISS-PROT and TrEMBL sequence databases (http://www.toulouse. inra.fr/prodom.html), ProDom-CG results from a similar domain analysis as applied to completed genomes (http://www.toulouse.inra.fr/prodomCG.html). Recent improvements to the ProDom database and its server include: scaling up to include sequences from TrEMBL, addition of Pfam-A entries to the set of expert validated families, assignment of stable accession numbers, consistency indicators for domain families,domain arrangements of sub-families and links to Pfam-A.
引用
收藏
页码：267 / 269
页数：3
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