H-L curve: A Novel 2D Graphical Representation of Protein Sequences

被引：0
|
作者：
Li, Yongfan [1 ]
Huang, Guohua [2 ]
Liao, Bo [2 ]
Liu, Zanbo [2 ]
机构：
[1] Hunan First Normal Coll, Changsha 410002, Hunan, Peoples R China
[2] Hunan Univ, Sch Comp & Commun, Changsha 410082, Hunan, Peoples R China
来源：
MATCH-COMMUNICATIONS IN MATHEMATICAL AND IN COMPUTER CHEMISTRY | 2009年 / 61卷 / 02期
关键词：
DNA; SIMILARITY; ALIGNMENT;
D O I：
暂无
中图分类号：
O6 [化学];
学科分类号：
0703 ;
摘要：
According to the partial order constructed on a selected pair of physico-chemical properties of amino acids, we presented a novel 2D graphical representation of protein sequences which is called an H-L curve. The representations are mathematically proven to be no circuit (i.e., without any degeneracy), and associated with protein sequences in a one-to-one manner. In addition, our graphical curves allow more conveniently a visual inspection of protein sequences alignment. We illustrated our approach on two examples.
引用
收藏
页码：519 / 532
页数：14
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