Genetic Association Study Between the COL11A1 and COL18A1 Genes and High Myopia in a Han Chinese Population

被引:3
作者
Wu, Haiyan [1 ,2 ,3 ,4 ]
Jiang, Lingxi [1 ,2 ]
Zheng, Rui [1 ,2 ]
Luo, Dongyan [1 ,2 ]
Liu, Xiaoqi [3 ,4 ]
Hao, Fang [3 ,4 ]
Jiang, Zhilin [3 ,4 ]
Gong, Bo [1 ,2 ,3 ,4 ,5 ]
Yang, Zhenglin [1 ,2 ,3 ,4 ,5 ]
Shi, Yi [1 ,2 ,3 ,4 ,5 ]
机构
[1] Univ Elect Sci & Technol China, Sichuan Acad Med Sci, Sichuan Prov Key Lab Human Dis Gene Study, 32 First Ring Rd West 2, Chengdu 610072, Sichuan, Peoples R China
[2] Univ Elect Sci & Technol China, Sichuan Prov Peoples Hosp, Sch Med, 32 First Ring Rd West 2, Chengdu 610072, Sichuan, Peoples R China
[3] Sichuan Acad Med Sci, Dept Lab Med, Chengdu, Sichuan, Peoples R China
[4] Sichuan Prov Peoples Hosp, Chengdu, Sichuan, Peoples R China
[5] Chinese Acad Sci, Sichuan Translat Med Res Hosp, Chengdu, Sichuan, Peoples R China
关键词
high myopia; COL11A1; COL18A1; single nucleotide polymorphisms; case-control association study; GENOME-WIDE ASSOCIATION; REFRACTIVE ERROR; SUSCEPTIBILITY LOCUS; STICKLER-SYNDROME; COLLAGEN-XVIII; UNITED-STATES; MUTATIONS; VARIANTS; POLYMORPHISMS; METAANALYSIS;
D O I
10.1089/gtmb.2017.0235
中图分类号
Q5 [生物化学]; Q7 [分子生物学];
学科分类号
071010 ; 081704 ;
摘要
Purpose: To evaluate the association between high myopia (HM) and single nucleotide polymorphisms (SNPs) in collagen, type XI, alpha 1 (COL11A1) and collagen, type XVIII, alpha 1 (COL18A1) genes in a Han Chinese population. Materials and Methods: A total of 869 patients with HM and 804 controls were recruited for this study. The genotyping of five SNPs in COL11A1 and COL18A1 was performed using the SNaPshot method. The genotyping data were analyzed using the chi(2) test, and the linkage disequilibrium block structure was calculated and examined by Haploview software. Results: No statistically significant differences (p>0.05) were identified between HM cases and controls after a Bonferroni correction for multiple tests in the allele frequencies of COL11A1 and COL18A1 SNPs. However, the G allele of rs2236475 showed a susceptible effect for HM (p=0.016, corrected p=0.08, odds ratio [OR]=1.26). Moreover, the carriers of rs2236475GG genotype displayed an increased risk of HM compared with the rs2236475AA and rs2236475AG+AA genotypes (p=0.008, OR=1.79, confidence interval [95% CI]=1.18-2.64, uncorrected; p=0.012, OR=1.74, 95% CI=1.12-2.57, corrected, respectively). Conclusions: Our results suggested that common polymorphisms in these two candidate genes were unlikely to play major roles in the genetic susceptibility to HM. Nevertheless, to avoid filtering real myopia genes, the role of COL11A1 and COL18A1 in the pathogenesis of myopia requires more refinement in both animal models and human genetic epidemiological studies.
引用
收藏
页码:359 / 365
页数:7
相关论文
共 59 条
  • [1] Mosaicism in Marshall Syndrome
    Ala-Kokko, Leena
    Shanske, Alan L.
    [J]. AMERICAN JOURNAL OF MEDICAL GENETICS PART A, 2009, 149A (06) : 1327 - 1330
  • [2] Mutations in LRPAP1 Are Associated with Severe Myopia in Humans
    Aldahmesh, Mohammed A.
    Khan, Arif O.
    Alkuraya, Hisham
    Adly, Nouran
    Anazi, Shamsa
    Al-Saleh, Ahmed A.
    Mohamed, Jawahir Y.
    Hijazi, Hadia
    Prabakaran, Sarita
    Tacke, Marlene
    Al-Khrashi, Abdullah
    Hashem, Mais
    Reinheckel, Thomas
    Assiri, Abdullah
    Alkuraya, Fowzan S.
    [J]. AMERICAN JOURNAL OF HUMAN GENETICS, 2013, 93 (02) : 313 - 320
  • [3] Eye shape in emmetropia and myopia
    Atchison, DA
    Jones, CE
    Schmid, KL
    Pritchard, N
    Pope, JM
    Strugnell, WE
    Riley, RA
    [J]. INVESTIGATIVE OPHTHALMOLOGY & VISUAL SCIENCE, 2004, 45 (10) : 3380 - 3386
  • [4] Burton T C, 1989, Trans Am Ophthalmol Soc, V87, P143
  • [5] Brain Malformations Associated With Knobloch Syndrome-Review of Literature, Expanding Clinical Spectrum, and Identification of Novel Mutations
    Caglayan, Ahmet Okay
    Baranoski, Jacob E.
    Aktar, Fesih
    Han, Wengi
    Tuysuz, Beyhan
    Guzel, Asian
    Guclu, Bulent
    Kaymakcalan, Hande
    Aktekin, Berrin
    Akgumus, Gozde Tugce
    Murray, Phillip B.
    Erson-Omay, Emine Z.
    Caglar, Caner
    Bakircioglu, Mehmet
    Sakalar, Yildirim Bayezit
    Guzel, Ebru
    Demir, Nihat
    Tuncer, Oguz
    Senturk, Senem
    Ekici, Saris
    Minja, Frank J.
    Sestan, Nenad
    Yasuno, Katsuhito
    Bilguvar, Kaya
    Caksen, Huseyin
    Gunel, Murat
    [J]. PEDIATRIC NEUROLOGY, 2014, 51 (06) : 806 - 813
  • [6] Nine Loci for Ocular Axial Length Identified through Genome-wide Association Studies, Including Shared Loci with Refractive Error
    Cheng, Ching-Yu
    Schache, Maria
    Ikram, M. Kamran
    Young, Terri L.
    Guggenheim, Jeremy A.
    Vitart, Veronique
    MacGregor, Stuart
    Verhoeven, Virginie J. M.
    Barathi, Veluchamy A.
    Liao, Jiemin
    Hysi, Pirro G.
    Bailey-Wilson, Joan E.
    St Pourcain, Beate
    Kemp, John P.
    McMahon, George
    Timpson, Nicholas J.
    Evans, David M.
    Montgomery, Grant W.
    Mishra, Aniket
    Wang, Ya Xing
    Wang, Jie Jin
    Rochtchina, Elena
    Polasek, Ozren
    Wright, Alan F.
    Amin, Najaf
    van Leeuwen, Elisabeth M.
    Wilson, James F.
    Pennell, Craig E.
    van Duijn, Cornelia M.
    de Jong, Paulus T. V. M.
    Vingerling, Johannes R.
    Zhou, Xin
    Chen, Peng
    Li, Ruoying
    Tay, Wan-Ting
    Zheng, Yingfeng
    Chew, Merwyn
    Burdon, Kathryn P.
    Craig, Jamie E.
    Iyengar, Sudha K.
    Igo, Robert P., Jr.
    Lass, Jonathan H., Jr.
    Chew, Emily Y.
    Haller, Toomas
    Mihailov, Evelin
    Metspalu, Andres
    Wedenoja, Juho
    Simpson, Claire L.
    Wojciechowski, Robert
    Hoehn, Rene
    [J]. AMERICAN JOURNAL OF HUMAN GENETICS, 2013, 93 (02) : 264 - 277
  • [7] Adult-onset myopia: The Genes in Myopia (GEM) twin study
    Dirani, Mohamed
    Shekar, Sri N.
    Baird, Paul N.
    [J]. INVESTIGATIVE OPHTHALMOLOGY & VISUAL SCIENCE, 2008, 49 (08) : 3324 - 3327
  • [8] Childhood gene-environment interactions and age-dependent effects of genetic variants associated with refractive error and myopia: The CREAM Consortium
    Fan, Qiao
    Guo, Xiaobo
    Tideman, J. Willem L.
    Williams, Katie M.
    Yazar, Seyhan
    Hosseini, S. Mohsen
    Howe, Laura D.
    St Pourcain, Beate
    Evans, David M.
    Timpson, Nicholas J.
    McMahon, George
    Hysi, Pirro G.
    Krapohl, Eva
    Wang, Ya Xing
    Jonas, Jost B.
    Baird, Paul Nigel
    Wang, Jie Jin
    Cheng, Ching-Yu
    Teo, Yik-Ying
    Wong, Tien-Yin
    Ding, Xiaohu
    Wojciechowski, Robert
    Young, Terri L.
    Parssinen, Olavi
    Oexle, Konrad
    Pfeiffer, Norbert
    Bailey-Wilson, Joan E.
    Paterson, Andrew D.
    Klaver, Caroline C. W.
    Plomin, Robert
    Hammond, Christopher J.
    Mackey, David A.
    He, Mingguang
    Saw, Seang-Mei
    Williams, Cathy
    Guggenheim, Jeremy A.
    [J]. SCIENTIFIC REPORTS, 2016, 6
  • [9] Mutations of P4HA2 encoding prolyl 4-hydroxylase 2 are associated with nonsyndromic high myopia
    Guo, Hui
    Tong, Ping
    Liu, Yanling
    Xia, Lu
    Wang, Tianyun
    Tian, Qi
    Li, Ying
    Hu, Yidiao
    Zheng, Yu
    Jin, Xuemin
    Li, Yunping
    Xiong, Wei
    Tang, Beisha
    Feng, Yong
    Li, Jiada
    Pan, Qian
    Hu, Zhengmao
    Xia, Kun
    [J]. GENETICS IN MEDICINE, 2015, 17 (04) : 300 - 306
  • [10] SLC39A5 mutations interfering with the BMP/TGF-β pathway in non-syndromic high myopia
    Guo, Hui
    Jin, Xuemin
    Zhu, Tengfei
    Wang, Tianyun
    Tong, Ping
    Tian, Lei
    Peng, Yu
    Sun, Liangdan
    Wan, Anran
    Chen, Jingjing
    Liu, Yanling
    Li, Ying
    Tian, Qi
    Xia, Lu
    Zhang, Lusi
    Pan, Yongcheng
    Lu, Lina
    Liu, Qiong
    Shen, Lu
    Li, Yunping
    Xiong, Wei
    Li, Jiada
    Tang, Beisha
    Feng, Yong
    Zhang, Xuejun
    Zhang, Zhuohua
    Pan, Qian
    Hu, Zhengmao
    Xia, Kun
    [J]. JOURNAL OF MEDICAL GENETICS, 2014, 51 (08) : 518 - 525