Spatio-temporal deep learning method for ADHD fMRI classification

被引:141
作者
Mao, Zhenyu [1 ,2 ]
Su, Yi [3 ,4 ,5 ]
Xu, Guangquan [6 ]
Wang, Xueping [3 ,4 ,5 ]
Huang, Yu [1 ]
Yue, Weihua [3 ,5 ,7 ]
Sun, Li [3 ,4 ,5 ]
Xiong, Naixue [6 ]
机构
[1] Peking Univ, Natl Engn Res Ctr Software Engn, Beijing 100871, Peoples R China
[2] Peking Univ, Sch Software & Microelect, Beijing 100871, Peoples R China
[3] Peking Univ, Inst Mental Hlth, Hosp 6, Beijing 100191, Peoples R China
[4] Peking Univ, Minist Hlth, Key Lab Mental Hlth, Beijing 100191, Peoples R China
[5] Peking Univ, Natl Clin Res Ctr Mental Disorders, Beijing 100191, Peoples R China
[6] Tianjin Univ, Coll Intelligence & Comp, Tianjin Key Lab Adv Networking TANK, Tianjin, Peoples R China
[7] Peking Univ, PKU IDG McGovern Inst Brain Res, Beijing 100871, Peoples R China
基金
中国国家自然科学基金;
关键词
Spatio-temporal; Deep learning; ADHD; fMRI classification; granular computing;
D O I
10.1016/j.ins.2019.05.043
中图分类号
TP [自动化技术、计算机技术];
学科分类号
0812 ;
摘要
Attention Deficit/Hyperactivity Disorder (ADHD) is one kind of neurodevelopmental disorders common in children. Due to the complexity of the pathological mechanism, there is a lack of objective diagnostic methods up to now. This paper aimed to propose automatic ADHD diagnostic method using resting state functional magnetic resonance imaging (rs-fMRI) data with the spatio-temporal deep learning models. Unlike traditional methods, this paper constructed a deep learning method called 4-D CNN based on granular computing which were trained based on derivative changes in entropy, and can calculate granularity at a coarse level by stacking layers. Considering the structure of rs-fMRI as time-series 3-D frames, several models of spatial and temporal granular computing and fusion were proposed, including feature pooling, long short-term memory (LSTM) and spatio-temporal convolution. This paper introduced an approach to augment dataset which can sample one subject's rs-fMRI frames into several relatively short term pieces with a fixed stride. The public dataset of ADHD-200 Consortium was used to train and validate our method. And the results of evaluations showed that our method outperformed traditional methods on the dataset (accuracy: 71.3%, AUC: 0.80). Therefore, our 4-D CNN method can be used to build more accurate automatic assistant diagnosis tool of ADHD. (C) 2019 Elsevier Inc. All rights reserved.
引用
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页码:1 / 11
页数:11
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