RETRACTED: Biomarkers for Breast Adenocarcinoma Using In Silico Approaches (Retracted Article)

被引:4
作者
Pandi, Jhansi [1 ]
Arulprakasam, Ajucarmelprecilla [1 ]
Dhandapani, Ranjithkumar [2 ]
Ramanathan, Saikishore [1 ]
Thangavelu, Sathiamoorthi [1 ]
Chinnappan, Jayaprakash [3 ]
Vidhya Rajalakshmi, V. [3 ]
Alghamdi, Saad [4 ]
Shesha, Nashwa Talaat [5 ]
Prasath, S. [6 ]
机构
[1] Alagappa Univ, Dept Microbiol, Med Microbiol Unit, Karaikkudi, Tamil Nadu, India
[2] Chimertech Private Ltd, Chennai, Tamil Nadu, India
[3] Bharathiar Univ, Dept Bioinformat, Coimbatore, Tamil Nadu, India
[4] Umm Al Qura Univ, Fac Appl Med Sci, Lab Med Dept, Mecca, Saudi Arabia
[5] Hera Gen Hosp, Directorate Hlth Affairs, Mecca, Saudi Arabia
[6] Mizan Tepi Univ, Coll Engn & Technol, Dept Mech Engn, Tepi, Ethiopia
关键词
CLINICAL-SIGNIFICANCE; CANCER; EXPRESSION; PROGNOSIS;
D O I
10.1155/2022/7825272
中图分类号
R [医药、卫生];
学科分类号
10 ;
摘要
This work elucidates the idea of finding probable critical genes linked to breast adenocarcinoma. In this study, the GEO database gene expression profile data set (GSE70951) was retrieved to look for genes that were expressed variably across breast adenocarcinoma samples and healthy tissue samples. The genes were confirmed to be part of the PPI network for breast cancer pathogenesis and prognosis. In Cytoscape, the CytoHubba module was used to discover the hub genes. For correlation analysis, the predictive biomarker of these hub genes, as well as GEPIA, was used. A total of 155 (85 upregulated genes and 70 downregulated genes) were identified. By integrating the PPI and CytoHubba data, the major key/hub genes were selected from the results. The KM plotter is employed to find the prognosis of those major pivot genes, and the outcome shows worse prognosis in breast adenocarcinoma patients. Further experimental validation will show the predicted expression levels of those hub genes. The overall result of our study gives the consequences for the identification of a critical gene to ease the molecular targeting therapy for breast adenocarcinoma. It could be used as a prognostic biomarker and could lead to therapy options for breast adenocarcinoma.
引用
收藏
页数:12
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