Structural alphabets for conformational analysis of nucleic acids available at dnatco.datmos.org

被引：15

作者：

Cerny, Jiri ^{[1
]}

Bozikova, Paulina ^{[1
]}

Maly, Michal ^{[1
]}

Tykac, Michal ^{[1
]}

Biedermannova, Lada ^{[2
]}

Schneider, Bohdan ^{[2
]}

机构：

[1] Czech Acad Sci, Inst Biotechnol, Lab Struct Bioinformat Prot, Prumyslova 595, Vestec, Czech Republic

[2] Czech Acad Sci, Inst Biotechnol, Lab Biomol Recognit, Prumyslova 595, Vestec, Czech Republic

来源：

ACTA CRYSTALLOGRAPHICA SECTION D-STRUCTURAL BIOLOGY | 2020年 / 76卷

关键词：

structural alphabets; nucleic acids; annotation; validation; refinement; SECONDARY STRUCTURE; RNA; NOMENCLATURE; RECOGNITION; REFINEMENT; HYDRATION; SEQUENCE; FEATURES;

D O I：

10.1107/S2059798320009389

中图分类号：

Q5 [生物化学];

学科分类号：

071010 ; 081704 ;

摘要：

A detailed description of the dnatco.datmos.org web server implementing the universal structural alphabet of nucleic acids is presented. It is capable of processing any mmCIF- or PDB-formatted files containing DNA or RNA molecules; these can either be uploaded by the user or supplied as the wwPDB or PDB-REDO structural database access code. The web server performs an assignment of the nucleic acid conformations and presents the results for the intuitive annotation, validation, modeling and refinement of nucleic acids.

引用

页码：805 / 813

页数：9

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