Multilevel algorithms and evolutionary hybrid tools for enhanced production of arginine deiminase from Pseudomonas furukawaii RS3

被引:18
作者
Dhankhar, Rakhi [1 ]
Kumar, Ashwani [2 ]
Kumar, Sanjay [1 ]
Chhabra, Deepak [2 ]
Shukla, Pratyoosh [3 ]
Gulati, Pooja [1 ]
机构
[1] Maharshi Dayanand Univ, Dept Microbiol, Med Microbiol & Bioproc Technol Lab, Rohtak, Haryana, India
[2] Maharshi Dayanand Univ, Univ Inst Engn & Technol, Dept Mech Engn, Optimizat & Mechatron Lab, Rohtak, Haryana, India
[3] Maharshi Dayanand Univ, Dept Microbiol, Enzyme Technol & Prot Bioinformat Lab, Rohtak 124001, Haryana, India
关键词
Arginine deiminase; Anti-cancer enzyme; GA-ANN; GA-ANFIS; Purification; TUMOR-CELLS; PURIFICATION; ENZYMES; PATHWAY;
D O I
10.1016/j.biortech.2019.121789
中图分类号
S2 [农业工程];
学科分类号
0828 ;
摘要
In the present study a high arginine deiminase (ADI) yielding bacterium was isolated from soil samples of Haryana, India and identified as Pseudomonas furukawaii. The specific enzyme activity was optimized to 1.420 IU/ml by OFAT and further enhanced to 2.708 IU/ml (an increase of 90.7%) with the help of statistical parametric optimization approaches using GA-ANN and GA-ANFIS. The obtained value of the coefficient of correlation (R = 0.88) for ANN and epoch error (0.12) for ANFIS, indicates the prediction accuracy and strength of these data training models. ADI production was improved significantly in simple super broth media supplemented with 1.5% fructose and 1.75% arginine at pH 7 at 37 degrees C using multilevel algorithms and evolutionary hybrid tools. The native enzyme was partially purified (ten-fold) up to a specific enzyme activity of 29.559 IU/mg.
引用
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页数:9
相关论文
共 30 条
[1]   Arginine catabolism by sourdough lactic acid bacteria:: Purification and characterization of the arginine deiminase pathway enzymes from Lactobacillus sanfranciscensis CB1 [J].
De Angelis, M ;
Mariotti, L ;
Rossi, J ;
Servili, M ;
Fox, PF ;
Rollán, G ;
Gobbetti, M .
APPLIED AND ENVIRONMENTAL MICROBIOLOGY, 2002, 68 (12) :6193-6201
[2]   Arginine-lowering enzymes against cancer: a technocommercial analysis through patent landscape [J].
Dhankhar, Rakhi ;
Gulati, Pooja ;
Kumar, Sanjay ;
Kapoor, Rajeev Kumar .
EXPERT OPINION ON THERAPEUTIC PATENTS, 2018, 28 (08) :603-614
[3]   Genetic diversity, genetic structure and demographic history of Cycas simplicipinna (Cycadaceae) assessed by DNA sequences and SSR markers [J].
Feng, Xiuyan ;
Wang, Yuehua ;
Gong, Xun .
BMC PLANT BIOLOGY, 2014, 14
[4]   Amino acid deprivation using enzymes as a targeted therapy for cancer and viral infections [J].
Fernandes, H. S. ;
Silva Teixeira, C. S. ;
Fernandes, P. A. ;
Ramos, M. J. ;
Cerqueira, N. M. F. S. A. .
EXPERT OPINION ON THERAPEUTIC PATENTS, 2017, 27 (03) :283-297
[5]  
Feun Lynn, 2006, Expert Opin Investig Drugs, V15, P815, DOI 10.1517/13543784.15.7.815
[6]   Arginine deiminase inhibits proliferation of human leukemia cells more potently than asparaginase by inducing cell cycle arrest and apoptosis [J].
Gong, H ;
Zölzer, F ;
von Recklinghausen, G ;
Havers, W ;
Schweigerer, L .
LEUKEMIA, 2000, 14 (05) :826-829
[7]   Arginine deiminase: recent advances in discovery, crystal structure, and protein engineering for improved properties as an anti-tumor drug [J].
Han, Rui-Zhi ;
Xu, Guo-Chao ;
Dong, Jin-Jun ;
Ni, Ye .
APPLIED MICROBIOLOGY AND BIOTECHNOLOGY, 2016, 100 (11) :4747-4760
[8]  
Holt G.J., 1994, Bergey's Manual of Determinative Bacteriology
[9]   Characterization of a recombinant arginine deiminase from Enterococcus faecalis SK32.001 for L-citrulline production [J].
Jiang, Hangyu ;
Huang, Kai ;
Mu, Wanmeng ;
Jiang, Bo ;
Zhang, Tao .
PROCESS BIOCHEMISTRY, 2018, 64 :136-142
[10]   Purification of a dimeric arginine deiminase from Enterococcus faecium GR7 and study of its anti-cancerous activity [J].
Kaur, Baljinder ;
Kaur, Rajinder .
PROTEIN EXPRESSION AND PURIFICATION, 2016, 125 :53-60