Flaviramulus basaltis gen. nov., sp nov., a novel member of the family Flavobacteriaceae isolated from seafloor basalt

被引:21
作者
Einen, Jorn [1 ]
Ovreas, Lise [1 ]
机构
[1] Univ Bergen, Dept Biol, N-5020 Bergen, Norway
关键词
D O I
10.1099/ijs.0.64404-0
中图分类号
Q93 [微生物学];
学科分类号
071005 ; 100705 ;
摘要
Four yellow-pigmented, Gram-negative, motile strains were isolated from the glassy rind of submarine basaltic lava from the Jan Mayen area of the Norwegian/Greenland Sea at a depth of 1300 m below sea level. The four strains had identical 16S rRNA gene sequences and were indistinguishable in all phenotypic and chemotypic tests performed, indicating that they belonged to the same species. The strains had an obligately aerobic chemo-organotrophic metabolism. The strains were capable of growth at temperatures between -2 and 34 degrees C, at pH between 6.5 and 8.6, and at sea salt concentrations between 3 and 60 g l(-1). The strains were able to utilize organic acids, amino acids and sugars but not alcohols; they were also capable of hydrolysing a wide range of macromolecules. The predominant fatty acids were 15:0 iso, 15:1 iso, 15:0 iso 3-OH and 17:0 iso 3-OH. The mean DNA G + C content of the strains was 31.4 mol%. 16S rRNA gene sequence analysis indicated that the strains were affiliated to the genera Gaetbulibacter and Algibacter. However, phenotypic characteristics, especially aerobic metabolism, suggested that the strains should be placed within a new genus. On the basis of the polyphasic characterization of the four strains, it is suggested that the strains be included in the family Flavobacteriaceae as representatives of a novel species in a new genus, for which the name Flaviramulus basaltis gen. nov., sp. nov. is proposed. The type strain is H35(T) (= CIP 109091(T) = DSM 18180(T)).
引用
收藏
页码:2455 / 2461
页数:7
相关论文
共 24 条
[1]   CAROTENOIDS OF FLEXIBACTERIA .4. CAROTENOIDS OF 2 FURTHER PIGMENT TYPES [J].
AASEN, AJ ;
JENSEN, SL .
ACTA CHEMICA SCANDINAVICA, 1966, 20 (08) :2322-&
[2]  
[Anonymous], 2005, Bergey's Manual of Systemic Bacteriology
[3]  
[Anonymous], 2004, PHYLIP PHYLOGENY INF
[4]   Cutting a gordian knot: Emended classification and description of the genus Flavobacterium, emended description of the family Flavobacteriaceae, and proposal of Flavobacterium hydatis nom nov (basonym, Cytophaga aquatilis Strohl and Tait 1978) [J].
Bernardet, JF ;
Segers, P ;
Vancanneyt, M ;
Berthe, F ;
Kersters, K ;
Vandamme, P .
INTERNATIONAL JOURNAL OF SYSTEMATIC BACTERIOLOGY, 1996, 46 (01) :128-148
[5]  
Bernardet JF, 2002, INT J SYST EVOL MICR, V52, P1049, DOI 10.1099/00207713-52-3-1049
[6]  
Bowman J. P., 2005, PROKARYOTES EVOLVING
[7]   Novel members of the family Flavobacteriaceae from Antarctic maritime habitats including Subsaximicrobium wynnwilliamsii gen. nov., sp nov., Subsaximicrobium saxinquililnus sp nov., Subsaxibacter broadyi gen. nov., sp nov., Lacinutrix copepodicola gen. nov., sp nov., and novel species of the genera Bizionia, Gelidibacter and Gillisia [J].
Bowman, JP ;
Nichols, DS .
INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY, 2005, 55 :1471-1486
[8]   MatGAT: An application that generates similarity/identity matrices using protein or DNA sequences [J].
Campanella, JJ ;
Bitincka, L ;
Smalley, J .
BMC BIOINFORMATICS, 2003, 4 (1)
[9]  
Collins CH., 2004, COLLINS LYNES MICROB
[10]   Formosa algae gen. nov., sp nov., a novel member of the family Flavobacteriaceae [J].
Ivanova, EP ;
Alexeeva, YV ;
Flavier, S ;
Wright, JP ;
Zhukova, NV ;
Gorshkova, NM ;
Mikhailov, VV ;
Nicolau, DV ;
Christen, R .
INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY, 2004, 54 :705-711