An Online Database for Informing Ecological Network Models: http://kelpforest.ucsc.edu

被引:15
作者
Beas-Luna, Rodrigo [1 ]
Novak, Mark [2 ]
Carr, Mark H. [1 ]
Tinker, Martin T. [1 ,3 ]
Black, August [4 ]
Caselle, Jennifer E. [4 ]
Hoban, Michael [1 ]
Malone, Dan [1 ]
Iles, Alison [2 ]
机构
[1] Univ Calif Santa Cruz, Dept Ecol & Evolutionary Biol, Santa Cruz, CA 95064 USA
[2] Oregon State Univ, Dept Integrat Biol, Corvallis, OR 97331 USA
[3] US Geol Survey, Western Ecol Res Ctr, Santa Cruz, CA USA
[4] Univ Calif Santa Barbara, Inst Marine Sci, Santa Barbara, CA 93106 USA
基金
美国国家科学基金会; 美国海洋和大气管理局;
关键词
ALTERNATIVE STATES; FOOD WEBS; KELP; MANAGEMENT; PATTERN;
D O I
10.1371/journal.pone.0109356
中图分类号
O [数理科学和化学]; P [天文学、地球科学]; Q [生物科学]; N [自然科学总论];
学科分类号
07 ; 0710 ; 09 ;
摘要
Ecological network models and analyses are recognized as valuable tools for understanding the dynamics and resiliency of ecosystems, and for informing ecosystem-based approaches to management. However, few databases exist that can provide the life history, demographic and species interaction information necessary to parameterize ecological network models. Faced with the difficulty of synthesizing the information required to construct models for kelp forest ecosystems along the West Coast of North America, we developed an online database (http://kelpforest.ucsc.edu/) to facilitate the collation and dissemination of such information. Many of the database's attributes are novel yet the structure is applicable and adaptable to other ecosystem modeling efforts. Information for each taxonomic unit includes stage-specific life history, demography, and body-size allometries. Species interactions include trophic, competitive, facilitative, and parasitic forms. Each data entry is temporally and spatially explicit. The online data entry interface allows researchers anywhere to contribute and access information. Quality control is facilitated by attributing each entry to unique contributor identities and source citations. The database has proven useful as an archive of species and ecosystem-specific information in the development of several ecological network models, for informing management actions, and for education purposes (e.g., undergraduate and graduate training). To facilitate adaptation of the database by other researches for other ecosystems, the code and technical details on how to customize this database and apply it to other ecosystems are freely available and located at the following link (https://github.com/kelpforest-cameo/databaseui).
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页数:9
相关论文
共 46 条
[1]   Full compliance with harvest regulations yields ecological benefits: Northern Gulf of California case study [J].
Ainsworth, Cameron H. ;
Morzaria-Luna, Hem Nalini ;
Kaplan, Isaac C. ;
Levin, Phillip S. ;
Fulton, Elizabeth A. .
JOURNAL OF APPLIED ECOLOGY, 2012, 49 (01) :63-72
[2]   Recruitment facilitation can drive alternative states on temperate reefs [J].
Baskett, Marissa L. ;
Salomon, Anne K. .
ECOLOGY, 2010, 91 (06) :1763-1773
[3]   Latitudinal, seasonal, and small-scale spatial differences of the giant kelp, Macrocystis pyrifera, and an herbivore at their southern range limit in the northern hemisphere [J].
Beas-Luna, Rodrigo ;
Ladah, Lydia B. .
BOTANICA MARINA, 2014, 57 (02) :73-83
[4]   Mechanistic theory and modelling of complex food-web dynamics in Lake Constance [J].
Boit, Alice ;
Martinez, Neo D. ;
Williams, Richard J. ;
Gaedke, Ursula .
ECOLOGY LETTERS, 2012, 15 (06) :594-602
[5]  
Borrett SR, 2014, ECOL MODEL, V7158, P1
[6]   Climate-driven increases in storm frequency simplify kelp forest food webs [J].
Byrnes, Jarrett E. ;
Reed, Daniel C. ;
Cardinale, Bradley J. ;
Cavanaugh, Kyle C. ;
Holbrook, Sally J. ;
Schmitt, Russell J. .
GLOBAL CHANGE BIOLOGY, 2011, 17 (08) :2513-2524
[7]  
Cailliet G. M., 2000, BIOL CHARACTERISTICS
[8]  
Carr MH., ECOSYSTEMS CALIFORNI
[9]   Geographic variation in density, demography, and life history traits of a harvested, sex-changing, temperate reef fish [J].
Caselle, Jennifer E. ;
Hamilton, Scott L. ;
Schroeder, Donna M. ;
Love, Milton S. ;
Standish, Julie D. ;
Rosales-Casian, Jorge A. ;
Sosa-Nishizaki, Oscar .
CANADIAN JOURNAL OF FISHERIES AND AQUATIC SCIENCES, 2011, 68 (02) :288-303
[10]   Ecological forecasts: An emerging imperative [J].
Clark, JS ;
Carpenter, SR ;
Barber, M ;
Collins, S ;
Dobson, A ;
Foley, JA ;
Lodge, DM ;
Pascual, M ;
Pielke, R ;
Pizer, W ;
Pringle, C ;
Reid, WV ;
Rose, KA ;
Sala, O ;
Schlesinger, WH ;
Wall, DH ;
Wear, D .
SCIENCE, 2001, 293 (5530) :657-660