Effect of Probe Design on Chemiluminescence Detection of Hepatitis B Virus and Hepatitis C Virus

被引:7
作者
Ali, Zeeshan [1 ,2 ,3 ]
Tang, Yongjun [1 ]
Deng, Yan [4 ,5 ]
Li, Hanmei [1 ]
Wang, Zhifei [3 ]
Li, Zhiyang [2 ]
Dai, Jianguo [1 ]
Liu, Hongna [4 ,5 ]
Su, Enben [2 ,6 ]
Chen, Zhu [4 ,5 ]
Li, Song [4 ,5 ]
Chen, Hui [4 ,5 ]
Wang, Lijun [7 ,8 ,9 ]
机构
[1] Shenzhen Polytech, Postdoctoral Innovat Practice Base, Shenzhen 518055, Peoples R China
[2] Southeast Univ, Sch Biol Sci & Med Engn, State Key Lab Bioelect, Nanjing 210096, Jiangsu, Peoples R China
[3] Southeast Univ, Sch Chem & Chem Engn, Nanjing 211189, Jiangsu, Peoples R China
[4] Econ Forest Cultivat & Utilizat 2011 Collaborat I, Zhuzhou 412007, Peoples R China
[5] Hunan Univ Technol, Hunan Key Lab Biomed Nanomat & Devices, Zhuzhou 412007, Peoples R China
[6] Getein Biotechnol Co Ltd, Nanjing 211505, Jiangsu, Peoples R China
[7] Guangxi Univ, Guangxi Key Lab Clean Pulp & Paper Making & Pollu, Nanning 530004, Peoples R China
[8] Guangxi Univ, Coll Light Ind & Food Engn, Nanning 530004, Peoples R China
[9] Collaborat Innovat Ctr Guangxi Sugar Ind, Nanning 530004, Peoples R China
基金
中国国家自然科学基金;
关键词
Probe Design; Hepatitis B Virus (HBV); Hepatitis C Virus (HCV); Chemiluminescence; Biosensor; POLYMERASE-CHAIN-REACTION; BOVINE SERUM-ALBUMIN; NUMBER VARIATION ANALYSIS; MAGNETIC NANOPARTICLES; RAPID DETECTION; GOLD NANORODS; STEM-CELLS; ACETYLCHOLINESTERASE BIOSENSOR; ISOTHERMAL AMPLIFICATION; ULTRASENSITIVE DETECTION;
D O I
10.1166/nnl.2018.2585
中图分类号
TB3 [工程材料学];
学科分类号
0805 ; 080502 ;
摘要
Probe design is an important part in fabricating highly sensitive bioassays. In this paper, it is demonstrated that even small changes in probe design parameters can scupper efficiency of any biosensor. Different probes were designed for capturing HBV, and HCV biotin-labeled PCR amplified segments in a chemiluminescence detection assay. It was found that probes binding to the terminal sequence of target DNA generated strong detection signals; however, specificity of these probes was poor. Probe length was also noticed to play a critical role in the successful probetarget bio-recognition event. Probes with sequence length equal to 18 bp or higher outstripped the probes having sequence length shorter than 18 bp. Similarly, Probes with higher GC contents performed better in comparison with probes with lower GC contents. Conclusively, these results could be helpful in making highly efficient biosensors in future.
引用
收藏
页码:127 / 134
页数:8
相关论文
共 123 条
[1]   Recent Advances in Magnetic Nanoparticle Design for Cancer Therapy [J].
Ahmad, Rasheed ;
Ali, Zeeshan ;
Mou, Xianbo ;
Wang, Jiuhai ;
Yi, Huan ;
He, Nongyue .
JOURNAL OF NANOSCIENCE AND NANOTECHNOLOGY, 2016, 16 (09) :9393-9403
[2]   Integration of Nucleic Acid Extraction Protocol with Automated Extractor for Multiplex Viral Detection [J].
Ali, Zeeshan ;
Wang, Jiuhai ;
Mou, Xianbo ;
Tang, Yongjun ;
Li, Taotao ;
Liang, Wenbiao ;
Shah, Muhammad Ali A. ;
Ahmad, Rasheed ;
Li, Zhiyang ;
He, Nongyue .
JOURNAL OF NANOSCIENCE AND NANOTECHNOLOGY, 2017, 17 (02) :862-870
[3]   Simultaneous detection of multiple viruses based on chemiluminescence and magnetic separation [J].
Ali, Zeeshan ;
Wang, Jiuhai ;
Tang, Yongjun ;
Liu, Bin ;
He, Nongyue ;
Li, Zhiyang .
BIOMATERIALS SCIENCE, 2017, 5 (01) :57-66
[4]   Development of Magnetic Nanoparticles Based Nucleic Acid Extraction Method and Application in Hepatitis C Virus Chemiluminescent Detection [J].
Ali, Zeeshan ;
Liang, Wenbiao ;
Jin, Lian ;
Tang, Yongjun ;
Mou, Xianbo ;
Shah, Muhammad Ali A. ;
Yang, Haowen ;
Deng, Yan ;
He, Nongyue ;
Li, Zhiyang .
SCIENCE OF ADVANCED MATERIALS, 2015, 7 (07) :1233-1240
[5]   A cost-effective method to enhance adenoviral transduction of primary murine osteoblasts and bone marrow stromal cells [J].
Buo, Atum M. ;
Williams, Mark S. ;
Kerr, Jaclyn P. ;
Stains, Joseph P. .
BONE RESEARCH, 2016, 4
[6]   Mice with a heterozygous Lrp6 deletion have impaired fracture healing [J].
Burgers, Travis A. ;
Vivanco, Juan F. ;
Zahatnansky, Juraj ;
Moren, Andrew J. Vander ;
Mason, James J. ;
Williams, Bart O. .
BONE RESEARCH, 2016, 4
[7]   Highly sensitive non-stripping gold nanoparticles-based chemiluminescent detection of DNA hybridization coupled to magnetic beads [J].
Cai, Sheng ;
Xin, Liang ;
Lau, Choiwan ;
Lu, Jianzhong .
ANALYST, 2010, 135 (03) :615-620
[8]   From Sample to Answer: A Low-Cost Disposable Cartridge for Epidemic Detection on Site Based on 3D Printing Technology [J].
Chen, Hui ;
Wu, Yanqi ;
Chen, Zhu ;
Mou, Xianbo ;
Li, Zhiyang ;
Su, Enben ;
Deng, Yan ;
He, Nongyue .
NANOSCIENCE AND NANOTECHNOLOGY LETTERS, 2016, 8 (12) :1118-1126
[9]   Enhanced but hypofunctional osteoclastogenesis in an autosomal dominant osteopetrosis type II case carrying a c.1856C>T mutation in CLCN7 [J].
Chen, Xiang ;
Zhang, Kun ;
Hock, Janet ;
Wang, Chunyu ;
Yu, Xijie .
BONE RESEARCH, 2016, 4
[10]   An Novel Acetylcholinesterase Biosensor Based on Nano-Porous Pseudo Carbon Paste Electrode Modified with Gold Nanoparticles for Detection of Methyl Parathion [J].
Deng, Yan ;
Liu, Keke ;
Liu, Yuan ;
Dong, Hongming ;
Li, Song .
JOURNAL OF NANOSCIENCE AND NANOTECHNOLOGY, 2016, 16 (09) :9460-9467