Genetic variation in rice (Oryza sativa L.) germplasm from northern Laos

被引:6
作者
Muto, Chiaki [1 ]
Ebana, Kaworu [1 ]
Kawano, Kazuaki [2 ]
Bounphanousay, Viengphone [3 ]
Bounphanousay, Chay [3 ]
Kanyavong, Kongppanh [3 ]
Inthapanya, Phoumi [3 ]
Boualaphanh, Chanthakone [3 ]
Sato, Tadashi [4 ]
Ishikawa, Ryuji [5 ]
Sato, Yo-Ichiro [6 ,9 ]
Yanagihara, Seiji [7 ]
Fukuta, Yoshimichi [8 ]
机构
[1] Natl Agr & Food Org NARO, Genet Resources Ctr, 2-1-2 Kannondai, Tsukuba, Ibaraki 3058602, Japan
[2] Inst Southern Cultural Folklore, 2638-809 Kirishima Taguchi, Kirishima, Kagoshima 8994201, Japan
[3] NAFRI, Rice Res Ctr, Nongviengkham, Vientiane, Laos
[4] Tohoku Univ, Grad Sch Agr Sci, Aoba Ku, 468-1 Aramaki Aza, Sendai, Miyagi 9810845, Japan
[5] Hirosaki Univ, Fac Agr & Life Sci, 3 Bunkyo Cho, Hirosaki, Aomori 0368561, Japan
[6] Res Inst Humanity & Nat, Kita Ku, 457-4 Motoymna, Kyoto 6038047, Japan
[7] JIRCAS, 1-1 Ohwashi, Tsukuba, Ibaraki 3058686, Japan
[8] JIRCAS, Trop Agr Res Front, 1091-1 Maezato Kawarabaru, Ishigaki, Okinawa 9070002, Japan
[9] Kyoto Prefectural Univ, Res Ctr Japanese Food Culture KPU, Sakyo Ku, 1-5 Nakaragi, Kyoto 6068522, Japan
关键词
genetic variation; heading; geographic distribution; landrace; lowland; upland; rice (Oryza sativa L.); BASIC VEGETATIVE GROWTH; RESISTANCE; DIVERSITY; CLASSIFICATION; SENSITIVITY; FARMERS; CAVARA;
D O I
10.1270/jsbbs.18086
中图分类号
S3 [农学(农艺学)];
学科分类号
0901 ;
摘要
We assessed genetic variation in rice germplasm in northern Laos and Vientiane province from polymorphism data of SSR markers. We classified 314 accessions into three clusters; Ia (corresponding to the lowland Japonica Group), Ib (upland Japonica Group) and II (Indica Group). The accessions of cluster Ib grew mainly in mountainous fields, and those of cluster II grew commonly in basins and along rivers. The few accessions of cluster Ia grew in only three provinces: Houaphanh, Xiangkhouang and Vientiane. Lowland cultivars in cluster II were predominant in Vientiane. Variations in heading date under short-day conditions in 2014 and long-day conditions in 2015 indicate that many accessions were sensitive to the photoperiod on account of complex genetic mechanisms underlying both photoperiod sensitivity and basic vegetative growth. A total of 219 among whole accessions were classified into 6 groups: E1-3 and L1-3. E2 and E3 were dominant in clusters Ib and II; E1 and L1-3 were minor groups. These results demonstrate characteristic distributions of the Indica and Japonica Group's germplasms in northern Laos and their genetic variation in heading date.
引用
收藏
页码:272 / 278
页数:7
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