A rapid one-step multiplex RT-PCR assay for the simultaneous detection of five citrus viroids in China

被引:33
作者
Wang, Xuefeng [1 ]
Zhou, Changyong [1 ]
Tang, Kezhi [1 ]
Zhou, Yan [1 ]
Li, Zhongan [1 ]
机构
[1] Southwest Univ, Natl Citrus Virus Exclus Ctr, Citrus Res Inst, Chongqing 400712, Peoples R China
关键词
Citrus viroids; Multiplex; One-step RT-PCR; Nucleic acid extraction method; NUCLEOTIDE-SEQUENCE; SECONDARY STRUCTURE; EXOCORTIS; GRAPEFRUIT; VIRUS;
D O I
10.1007/s10658-008-9386-y
中图分类号
S3 [农学(农艺学)];
学科分类号
0901 ;
摘要
Citrus plants are natural hosts of five viroid species and large numbers of sequence variants. In this paper a simple and sensitive one step multiplex RT-PCR protocol with an internal control was utilised to simultaneously detect and differentiate five citrus viroids: Citrus exocortis viroid (CEVd), Citrus bent leaf viroid (CBLVd), Hop stunt viroid (HSVd), Citrus viroid-III (CVd-III) and Citrus viroid-IV (CVd-IV). In addition, a micro and rapid total nucleic acid extraction method was developed and the protocol applied to evaluate the occurrence and distribution of citrus viroids in China.
引用
收藏
页码:175 / 180
页数:6
相关论文
共 24 条
[1]  
AMY MB, 2004, BMC PLANT BIOL, V4, P14, DOI DOI 10.1186/1471-2229-4-14
[2]   NUCLEOTIDE-SEQUENCE OF A NEW VIROID SPECIES, CITRUS BENT LEAF VIROID (CBLVD) ISOLATED FROM GRAPEFRUIT IN ISRAEL [J].
ASHULIN, L ;
LACHMAN, O ;
HADAS, R ;
BARJOSEPH, M .
NUCLEIC ACIDS RESEARCH, 1991, 19 (17) :4767-4767
[3]   Construction of a multiprobe for the simultaneous detection of viroids infecting citrus trees [J].
Cohen, Oded ;
Batuman, Ozgur ;
Stanbekova, Gulshan ;
Sano, Teruo ;
Mawassi, Munir ;
Bar-Joseph, Moshe .
VIRUS GENES, 2006, 33 (03) :287-292
[4]   The viroid: Biological oddity or evolutionary fossil? [J].
Diener, TO .
ADVANCES IN VIRUS RESEARCH, VOL 57, 2001, 57 :137-184
[5]  
Duran-Vila N., 1993, P 12 C INT ORG CITRU, P202
[6]  
Duran-Vila N, 2000, COMPENDIUM CITRUS DI, P51
[7]   A DEFINITION OF CITRUS VIROID GROUPS AND THEIR RELATIONSHIP TO THE EXOCORTIS DISEASE [J].
DURANVILA, N ;
ROISTACHER, CN ;
RIVERABUSTAMANTE, R ;
SEMANCIK, JS .
JOURNAL OF GENERAL VIROLOGY, 1988, 69 :3069-3080
[8]   Viroids and viroid-host interactions [J].
Flores, R ;
Hernández, C ;
Martínez de Alba, AE ;
Daròs, JA ;
Di Serio, F .
ANNUAL REVIEW OF PHYTOPATHOLOGY, 2005, 43 :117-+
[9]   NUCLEOTIDE-SEQUENCE AND SECONDARY STRUCTURE OF CITRUS EXOCORTIS AND CHRYSANTHEMUM STUNT VIROID [J].
GROSS, HJ ;
KRUPP, G ;
DOMDEY, H ;
RABA, M ;
JANK, P ;
LOSSOW, C ;
ALBERTY, H ;
RAMM, K ;
SANGER, HL .
EUROPEAN JOURNAL OF BIOCHEMISTRY, 1982, 121 (02) :249-257
[10]  
Hutton Ronald J., 2000, Horticultural Reviews, V24, P277, DOI 10.1002/9780470650776.ch6