Ortho-7 bound to the active-site gorge of free and OP-conjugated acetylcholinesterase: Cation- interactions

Despite the immense importance of cation- interactions prevailing in bispyridinium drug acetylcholinesterase (AChE) complexes, a precise description of cation- interactions at molecular level has remained elusive. Here, we consider a bispyridinium drug, namely, ortho-7 in three different structures of AChE, with and without complexation with organophosphorus (OP) compounds for detailed investigation using all atom molecular dynamics simulation. By quantum mechanical calculations, Y72, W86, Y124, W286, Y337, and Y341 aromatic residues of the enzyme are investigated for possible cation- interactions with ortho-7. The cation- interactions in each of the protein-drug complexes are studied using distance, angle, a suitable functional form of them, and electrostatic criteria. The variation of cation- functional is remarkably consistent with that of the Columbic variation. It is clearly observed that cation- interactions for some of the residues in the catalytic active site (CAS) and peripheral anionic site (PAS) of the enzyme are either enhanced or reduced based on the nature of OP conjugation (i.e., nerve gas, tabun or pesticide, fenamiphos) when compared with the OP-free enzyme. The strength of cation- interaction is strongly dependent on the type OP conjugation. The effect of conjugation at CAS is also seen to influence the cation- interaction at the PAS region. The variation of cation- interactions on the type of conjugating OP compounds might be suggestive of a reason as to why wide spectrum drug against any OP poisoning is yet to arrive in the market. (c) 2015 Wiley Periodicals, Inc. Biopolymers 105: 10-20, 2015.