KinomeXplorer: an integrated platform for kinome biology studies

被引：250

作者：

Horn, Heiko ^{[1
]}

Schoof, Erwin M. ^{[2
]}

Kim, Jinho ^{[2
]}

Robin, Xavier ^{[2
]}

Miller, Martin L. ^{[3
]}

Diella, Francesca ^{[4
,5
]}

Palma, Anita ^{[6
]}

Cesareni, Gianni ^{[6
,7
]}

Jensen, Lars Juhl ^{[1
]}

Linding, Rune ^{[2
]}

机构：

[1] Univ Copenhagen, Fac Hlth Sci, Ctr Prot Res, Novo Nordisk Fdn, Copenhagen, Denmark

[2] Tech Univ Denmark DTU, Ctr Biol Sequence Anal CBS, Cellular Signal Integrat Grp C SIG, Dept Syst Biol, Lyngby, Denmark

[3] Mem Sloan Kettering Canc Ctr, Computat Biol Program, New York, NY 10021 USA

[4] European Mol Biol Lab, Struct & Computat Biol Unit, D-69012 Heidelberg, Germany

[5] Mol Hlth GmbH, Heidelberg, Germany

[6] Univ Roma Tor Vergata, Dept Biol, I-00173 Rome, Italy

[7] Fdn Santa Lucia, Ist Ricovero & Cura Carattere Sci, Rome, Italy

来源：

NATURE METHODS | 2014年 / 11卷 / 06期

关键词：

DISCOVERY;

D O I：

10.1038/nmeth.2968

中图分类号：

Q5 [生物化学];

学科分类号：

071010 ; 081704 ;

摘要：

引用

页码：603 / 604

页数：2

共 10 条

[1] Comprehensive assay of kinase catalytic activity reveals features of kinase inhibitor selectivity [J].

Anastassiadis, Theonie ;

Deacon, Sean W. ;

Devarajan, Karthik ;

Ma, Haiching ;

Peterson, Jeffrey R. .

NATURE BIOTECHNOLOGY, 2011, 29 (11) :1039-U117

[2] Comprehensive analysis of kinase inhibitor selectivity [J].

Davis, Mindy I. ;

Hunt, Jeremy P. ;

Herrgard, Sanna ;

Ciceri, Pietro ;

Wodicka, Lisa M. ;

Pallares, Gabriel ;

Hocker, Michael ;

Treiber, Daniel K. ;

Zarrinkar, Patrick P. .

NATURE BIOTECHNOLOGY, 2011, 29 (11) :1046-U124

[3] Phospho.ELM: a database of phosphorylation sites-update 2011 [J].

Dinkel, Holger ;

Chica, Claudia ;

Via, Allegra ;

Gould, Cathryn M. ;

Jensen, Lars J. ;

Gibson, Toby J. ;

Diella, Francesca .

NUCLEIC ACIDS RESEARCH, 2011, 39 :D261-D267

[4] Focus Issue: From Genomic Mutations to Oncogenic Pathways [J].

Gough, Nancy R. .

SCIENCE SIGNALING, 2013, 6 (268)

[5] Systems model of signaling identifies a molecular basis set for cytokine-induced apoptosis [J].

Janes, KA ;

Albeck, JG ;

Gaudet, S ;

Sorger, PK ;

Lauffenburger, DA ;

Yaffe, MB .

SCIENCE, 2005, 310 (5754) :1646-1653

[6] Phosphotyrosine Signaling: Evolving a New Cellular Communication System [J].

Lim, Wendell A. ;

Pawson, Tony .

CELL, 2010, 142 (05) :661-667

[7] Systematic discovery of in vivo phosphorylation networks [J].

Linding, Rune ;

Jensen, Lars Juhl ;

Ostheimer, Gerard J. ;

van Vugt, Marcel A. T. M. ;

Jorgensen, Claus ;

MIron, Ioana M. ;

Diella, Francesca ;

Colwill, Karen ;

Taylor, Lorne ;

Elder, Kelly ;

Metalnikov, Pavel ;

Nguyen, Vivian ;

Pasculescu, Adrian ;

Jin, Jing ;

Park, Jin Gyoon ;

Samson, Leona D. ;

Woodgett, James R. ;

Russell, Robert B. ;

Bork, Peer ;

Yaffe, Michael B. ;

Pawson, Tony .

CELL, 2007, 129 (07) :1415-1426

[8] Linear Motif Atlas for Phosphorylation-Dependent Signaling [J].

Miller, Martin Lee ;

Jensen, Lars Juhl ;

Diella, Francesca ;

Jorgensen, Claus ;

Tinti, Michele ;

Li, Lei ;

Hsiung, Marilyn ;

Parker, Sirlester A. ;

Bordeaux, Jennifer ;

Sicheritz-Ponten, Thomas ;

Olhovsky, Marina ;

Pasculescu, Adrian ;

Alexander, Jes ;

Knapp, Stefan ;

Blom, Nikolaj ;

Bork, Peer ;

Li, Shawn ;

Cesareni, Gianni ;

Pawson, Tony ;

Turk, Benjamin E. ;

Yaffe, Michael B. ;

Brunak, Soren ;

Linding, Rune .

SCIENCE SIGNALING, 2008, 1 (35)

[9] Reading protein modifications with interaction domains [J].

Seet, Bruce T. ;

Dikic, Ivan ;

Zhou, Ming-Ming ;

Pawson, Tony .

NATURE REVIEWS MOLECULAR CELL BIOLOGY, 2006, 7 (07) :473-483

[10] The Scientific Drunk and the Lamppost: Massive Sequencing Efforts in Cancer Discovery and Treatment [J].

Yaffe, Michael B. .

SCIENCE SIGNALING, 2013, 6 (269)

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