Multi-omics response of Pannonibacter phragmitetus BB to hexavalent chromium

被引:80
作者
Chai, Liyuan [1 ,2 ]
Ding, Chunlian [1 ]
Li, Jiawei [1 ]
Yang, Zhihui [1 ,2 ]
Shi, Yan [1 ,2 ]
机构
[1] Cent South Univ, Sch Met & Environm, Inst Environm Sci & Engn, Changsha 410083, Hunan, Peoples R China
[2] Natl Engn Res Ctr Heavy Met Pollut Control & Trea, Changsha 410083, Hunan, Peoples R China
基金
国家重点研发计划;
关键词
Hexavalent chromium; Pannonibacter phragmitetus BB; Bacterial response to Cr(VI); Quorum sensing; Chemotaxis; EXTRACELLULAR ELECTRON-TRANSFER; CR(VI) REDUCTION; SUPEROXIDE-DISMUTASES; PSEUDOMONAS-PUTIDA; QUINONE REDUCTASE; ESCHERICHIA-COLI; CHROMATE; PROTEIN; GENOME; GENE;
D O I
10.1016/j.envpol.2019.03.005
中图分类号
X [环境科学、安全科学];
学科分类号
08 ; 0830 ;
摘要
The release of hexavalent chromium [Cr(VI)] into water bodies poses a major threat to the environment and human health. However, studies of the biological response to Cr(VI) are limited. In this study, a toxic bacterial mechanism of Cr(VI) was investigated using Pannonibacter phragmitetus BB (hereafter BB), which was isolated from chromate slag. The maximum Cr(VI) concentrations with respect to the resistance and reduction by BB are 4000 mg L-1 and 2500 mg L-1, respectively. In the BB genome, more genes responsible for Cr(VI) resistance and reduction are observed compared with other P. phragmitetus strains. A total of 361 proteins were upregulated to respond to Cr(VI) exposure, including enzymes for Cr(VI) uptake, intracellular reduction, ROS detoxification, DNA repair, and Cr(VI) efflux and proteins associated with novel mechanisms involving extracellular reduction mediated by electron transfer, quorum sensing, and chemotaxis. Based on metabolomic analysis, 174 metabolites were identified. Most of the upregulated metabolites are involved in amino acid, glucose, lipid, and energy metabolisms. The results show that Cr(VI) induces metabolite production, while metabolites promote Cr(VI) reduction. Overall, multienzyme expression and metabolite production by BB contribute to its high ability to resist/reduce Cr(VI). This study provides details supporting the theory of Cr(VI) reduction and a theoretical basis for the efficient bioremoval of Cr(VI) from the environment. (C) 2019 Elsevier Ltd. All rights reserved.
引用
收藏
页码:63 / 73
页数:11
相关论文
共 86 条
[31]   Expanded microbial genome coverage and improved protein family annotation in the COG database [J].
Galperin, Michael Y. ;
Makarova, Kira S. ;
Wolf, Yuri I. ;
Koonin, Eugene V. .
NUCLEIC ACIDS RESEARCH, 2015, 43 (D1) :D261-D269
[32]   The Colorful World of Extracellular Electron Shuttles [J].
Glasser, Nathaniel R. ;
Saunders, Scott H. ;
Newman, Dianne K. .
ANNUAL REVIEW OF MICROBIOLOGY, VOL 71, 2017, 71 :731-751
[33]   ChrR, a soluble quinone reductase of Pseudomonas putida that defends against H2O2 [J].
Gonzalez, CF ;
Ackerley, DF ;
Lynch, SV ;
Matin, A .
JOURNAL OF BIOLOGICAL CHEMISTRY, 2005, 280 (24) :22590-22595
[34]   Chemotaxis of Pseudomonas spp. to the polyaromatic hydrocarbon naphthalene [J].
Grimm, AC ;
Harwood, CS .
APPLIED AND ENVIRONMENTAL MICROBIOLOGY, 1997, 63 (10) :4111-4115
[35]   Hexavalent Chromium Sources and Distribution in California Groundwater [J].
Hausladen, Debra M. ;
Alexander-Ozinskas, Annika ;
McClain, Cynthia ;
Fendorf, Scott .
ENVIRONMENTAL SCIENCE & TECHNOLOGY, 2018, 52 (15) :8242-8251
[36]   Hexavalent Chromium Generation within Naturally Structured Soils and Sediments [J].
Hausladen, Debra M. ;
Fendorf, Scott .
ENVIRONMENTAL SCIENCE & TECHNOLOGY, 2017, 51 (04) :2058-2067
[37]   Glutathione transferases [J].
Hayes, JD ;
Flanagan, JU ;
Jowsey, IR .
ANNUAL REVIEW OF PHARMACOLOGY AND TOXICOLOGY, 2005, 45 :51-88
[38]   Characterization and genomic analysis of a highly chromate resistant and reducing bacterial strain Lysinibacillus fusiformis ZC1 [J].
He, Minyan ;
Li, Xiangyang ;
Liu, Hongliang ;
Miller, Susan J. ;
Wang, Gejiao ;
Rensing, Christopher .
JOURNAL OF HAZARDOUS MATERIALS, 2011, 185 (2-3) :682-688
[39]   The Functional Mechanisms and Application of Electron Shuttles in Extracellular Electron Transfer [J].
Huang, Bin ;
Gao, Shumei ;
Xu, Zhixiang ;
He, Huan ;
Pan, Xuejun .
CURRENT MICROBIOLOGY, 2018, 75 (01) :99-106
[40]   KEGG as a reference resource for gene and protein annotation [J].
Kanehisa, Minoru ;
Sato, Yoko ;
Kawashima, Masayuki ;
Furumichi, Miho ;
Tanabe, Mao .
NUCLEIC ACIDS RESEARCH, 2016, 44 (D1) :D457-D462