Automated Detection and Measurement of Isolated Retinal Arterioles by a Combination of Edge Enhancement and Cost Analysis

被引:8
作者
Fernandez, Jose A. [1 ]
Bankhead, Peter [2 ]
Zhou, Huiyu [3 ]
McGeown, J. Graham [1 ]
Curtis, Tim M. [1 ]
机构
[1] Queens Univ Belfast, Ctr Med Expt, Belfast, Antrim, North Ireland
[2] Queens Univ Belfast, Ctr Canc Res & Cell Biol, Belfast, Antrim, North Ireland
[3] Queens Univ Belfast, Sch Elect Elect Engn & Comp Sci, Belfast, Antrim, North Ireland
基金
英国工程与自然科学研究理事会; 英国生物技术与生命科学研究理事会;
关键词
COMPUTER-BASED METHOD; CEREBRAL-ARTERIES; PHOSPHORYLATION; PHYSIOLOGY; AGREEMENT; CHANNELS; KINASE; BRAIN; CELL;
D O I
10.1371/journal.pone.0091791
中图分类号
O [数理科学和化学]; P [天文学、地球科学]; Q [生物科学]; N [自然科学总论];
学科分类号
07 ; 0710 ; 09 ;
摘要
Pressure myography studies have played a crucial role in our understanding of vascular physiology and pathophysiology. Such studies depend upon the reliable measurement of changes in the diameter of isolated vessel segments over time. Although several software packages are available to carry out such measurements on small arteries and veins, no such software exists to study smaller vessels (<50 mu m in diameter). We provide here a new, freely available open-source algorithm, MyoTracker, to measure and track changes in the diameter of small isolated retinal arterioles. The program has been developed as an ImageJ plug-in and uses a combination of cost analysis and edge enhancement to detect the vessel walls. In tests performed on a dataset of 102 images, automatic measurements were found to be comparable to those of manual ones. The program was also able to track both fast and slow constrictions and dilations during intraluminal pressure changes and following application of several drugs. Variability in automated measurements during analysis of videos and processing times were also investigated and are reported. MyoTracker is a new software to assist during pressure myography experiments on small isolated retinal arterioles. It provides fast and accurate measurements with low levels of noise and works with both individual images and videos. Although the program was developed to work with small arterioles, it is also capable of tracking the walls of other types of microvessels, including venules and capillaries. It also works well with larger arteries, and therefore may provide an alternative to other packages developed for larger vessels when its features are considered advantageous.
引用
收藏
页数:11
相关论文
共 37 条
[1]   An Active Contour Model for Segmenting and Measuring Retinal Vessels [J].
Al-Diri, Bashir ;
Hunter, Andrew ;
Steel, David .
IEEE TRANSACTIONS ON MEDICAL IMAGING, 2009, 28 (09) :1488-1497
[2]   Contractile proteins in pericytes at the blood-brain and blood-retinal barriers [J].
Bandopadhyay, R ;
Orte, C ;
Lawrenson, JG ;
Reid, AR ;
De Silva, S ;
Allt, G .
JOURNAL OF NEUROCYTOLOGY, 2001, 30 (01) :35-44
[3]  
Bland JM, 1999, STAT METHODS MED RES, V8, P135, DOI 10.1177/096228029900800204
[4]   STATISTICAL METHODS FOR ASSESSING AGREEMENT BETWEEN TWO METHODS OF CLINICAL MEASUREMENT [J].
BLAND, JM ;
ALTMAN, DG .
LANCET, 1986, 1 (8476) :307-310
[5]  
Burke M, 2013, CURR VASC P IN PRESS
[6]  
Chan SL, 2013, FASEB J IN PRESS
[7]   Therapeutically Relevant Concentrations of Raloxifene Dilate Pressurized Rat Resistance Arteries via Calcium-Dependent Endothelial Nitric Oxide Synthase Activation [J].
Chan, Yau Chi ;
Leung, Fung Ping ;
Wong, Wing Tak ;
Tian, Xiao Yu ;
Yung, Lai Ming ;
Lau, Chi Wai ;
Tsang, Suk Ying ;
Yao, Xiaoqiang ;
Chen, Zhen Yu ;
Huang, Yu .
ARTERIOSCLEROSIS THROMBOSIS AND VASCULAR BIOLOGY, 2010, 30 (05) :992-U235
[8]   Raloxifene improves vascular reactivity in pressurized septal coronary arteries of ovariectomized hamsters fed cholesterol diet [J].
Chan, Yau-Chi ;
Leung, Fung Ping ;
Tian, Xiao Yu ;
Yung, Lai Ming ;
Lau, Chi Wai ;
Chen, Zhen Yu ;
Yao, Xiaoqiang ;
Laher, Ismail ;
Huang, Yu .
PHARMACOLOGICAL RESEARCH, 2012, 65 (02) :182-188
[9]   Structure-activity relationships of vanilloid receptor agonists for arteriolar TRPV1 [J].
Czikora, A. ;
Lizanecz, E. ;
Bako, P. ;
Rutkai, I. ;
Ruzsnavszky, F. ;
Magyar, J. ;
Porszasz, R. ;
Kark, T. ;
Facsko, A. ;
Papp, Z. ;
Edes, I. ;
Toth, A. .
BRITISH JOURNAL OF PHARMACOLOGY, 2012, 165 (06) :1801-1812
[10]   Acidosis Dilates Brain Parenchymal Arterioles by Conversion of Calcium Waves to Sparks to Activate BK Channels [J].
Dabertrand, Fabrice ;
Nelson, Mark T. ;
Brayden, Joseph E. .
CIRCULATION RESEARCH, 2012, 110 (02) :285-294